PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO51664
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family HD-ZIP
Protein Properties Length: 326aa    MW: 36818.5 Da    PI: 4.3188
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO51664genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.45.6e-1987141357
               --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
  Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
               k++++t++q++ Le+ Fe ++++  e++ +LAk+lgL+ rqV +WFqNrRa++k+
  OMO51664  87 KKRRLTATQVQFLERSFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARYKN 141
               45689************************************************95 PP

2HD-ZIP_I/II129.21.7e-4187178293
  HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                  kkrrl++ qv++LE+sFe e+kLeperKv+la+eLglqprqva+WFqnrRAR+k+kqlEkdy++Lk++yd+lk++ ++L ke+++L++e+++
     OMO51664  87 KKRRLTATQVQFLERSFEVENKLEPERKVQLAKELGLQPRQVAIWFQNRRARYKNKQLEKDYDSLKASYDKLKADYDNLLKEKDNLKNEVSA 178
                  9**************************************************************************************99875 PP

Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MKGGEICGSS NMNVLLQSKP LSCSSEVMES LWIPSTTSSS LQDHPKPIIS YKNVNGVDTT  60
ELPFFQPFDK AENGDDDFDG SFQPAGKKRR LTATQVQFLE RSFEVENKLE PERKVQLAKE  120
LGLQPRQVAI WFQNRRARYK NKQLEKDYDS LKASYDKLKA DYDNLLKEKD NLKNEVSALK  180
EKLLEREEGI ENLESLDHAI NSSNAESEKL DDSAGLSPEN VSHVPLPVCK QEEAASSAKS  240
DIFDSDSPHY TDGNYSSLIE PADSSNVFEP DQSEFSQDEE DNLSNSLLHP PFFPKFEVDD  300
CYYEAHPSSC NFALPVEDQS FWSSLY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1135143RRARYKNKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.12e-43HD-ZIP family protein