PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO49698
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family G2-like
Protein Properties Length: 480aa    MW: 52750.5 Da    PI: 5.3653
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO49698genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like109.61.6e-34262316155
   G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
               kpr+rWtpeLHe+Fveav+qLGGse+AtPk +l+lmkv+gLt++hvkSHLQkYR+
  OMO49698 262 KPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRT 316
               79****************************************************8 PP
2Myb_DNA-binding574.5e-18264315148
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+rWT+e++e +v+av+qlGg    t+k + + m  +g+t +++ks++qky+
         OMO49698 264 RMRWTPELHEAFVEAVNQLGGSeraTPKGVLKLMKvEGLTIYHVKSHLQKYR 315
                      89******************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 480 aa     Download sequence    
MEARPALSIQ RSGARQLSNL GVSGGLSSTL PALTTPLAET YPRLPDTQQV SAERELMTRP  60
PVHATSVPTN SGVVGHIFSS SSGFSSDLHY SSASPHENHS RNASFISQPP TNGSALALPQ  120
SSDSVLPQST ISSHYNKENS GSWCTDANFL DFPVNTPVQS SQVESNSCSG IMTSDDFSKR  180
NDWQEWADQL ITDDEALTSN WNELLVDNNV TDLEPKMTYQ VAKPCMTIPA QKPQVHPQFH  240
SSSVENRSVV NPSSSANSAP AKPRMRWTPE LHEAFVEAVN QLGGSERATP KGVLKLMKVE  300
GLTIYHVKSH LQKYRTARYR PEPSEESSEK KLTPIEEISS LDLKAGMGIT EALRLQMEVQ  360
KRLHEQLEIQ RNLQLRIEEQ GRYLQIMFEK QKSGLDKLKG SSSNLENLDP VAPSSDATKE  420
SSAKSEPEAS QMDHVKSKLE GTSQELDAKQ TEAESGDKEK AETCVSESSS QPSKCLRTEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28610.16e-90G2-like family protein