PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG93513.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 719aa MW: 78633.1 Da PI: 7.0792

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG93513.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	29.5	2e-09	93	168	2	69
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegek 69 Wt ++ +Li+a+r +++++rr k k +W +v k++ + g+ +r+++ C +kw+nl +++k + + ++ GBG93513.1 93 WTVEHMITLIRAKRdqdlhlaGLGHNIRRMKTKTWKWTDVEKRLVQMGVtSRKAEDCGKKWDNLYMQFKIVHKCKG 168 ************77777777778888999*********99999899***************8877655 PP

Sequence ? help Back to Top
Protein Sequence Length: 719 aa Download sequence
MSGITRGVAK INVGADDTLG DCDGARGEDC STSDGSNDNE EDDDGEMEIR PVGKKRGGPR 60 ATNKFTEPRT GRRGKKRAGH TSASEGAKNR DFWTVEHMIT LIRAKRDQDL HLAGLGHNIR 120 RMKTKTWKWT DVEKRLVQMG VTSRKAEDCG KKWDNLYMQF KIVHKCKGEL GKPDFFRLSS 180 WERKEGGFDF WMDERVYSEM KAISRGDHTI HPTNLADTGE AGGVQLPGPR GGQNESGGSD 240 GCGDGQDDDQ GSTRDSTFSG GGAGGCGKRK NSLVVGATET LQRTPKVAGV VMTEARVSRQ 300 LPAVVGQGQP RQPLPLQEAG ASGGGKTQST QKGDATASGT RTAAADHNTR SGLTEGAAEE 360 RVDDIRRDKG RRHGKRDGDD DXDRPLVTRL KGAAKEDGLE ERSKLWVDCD SFWGQGPGKP 420 LREAVGECAD YFIAISNGDA GVEPPATLIX PSNDVPRFKI EDPAQREPAL RRARSVEKLV 480 LRAIHGWIFK LSSRSAGFAR AESYISVDIA TNVARAVSQG HEWSNVVSPP IVYHTLAMKM 540 DVPLWFAGVK IVDRPEDDVM AARQEATVLR VVECWTDALW CGQWADGNRM KQERLSRLVD 600 CLRALLSXCM WIMRMGGDDD RXHYEACLYA SMVAKPTMMA AGSYIFNWRR HIVDSANLVL 660 DRIGKAHLTL GDYLHCIPEW CDCGLLFGYN AALKNAAEAA KHGWVGSGPA AEEDGDEGS

Sequence ? help Back to Top

Protein Sequence Length: 719 aa Download sequence

MSGITRGVAK INVGADDTLG DCDGARGEDC STSDGSNDNE EDDDGEMEIR PVGKKRGGPR  60
ATNKFTEPRT GRRGKKRAGH TSASEGAKNR DFWTVEHMIT LIRAKRDQDL HLAGLGHNIR  120
RMKTKTWKWT DVEKRLVQMG VTSRKAEDCG KKWDNLYMQF KIVHKCKGEL GKPDFFRLSS  180
WERKEGGFDF WMDERVYSEM KAISRGDHTI HPTNLADTGE AGGVQLPGPR GGQNESGGSD  240
GCGDGQDDDQ GSTRDSTFSG GGAGGCGKRK NSLVVGATET LQRTPKVAGV VMTEARVSRQ  300
LPAVVGQGQP RQPLPLQEAG ASGGGKTQST QKGDATASGT RTAAADHNTR SGLTEGAAEE  360
RVDDIRRDKG RRHGKRDGDD DXDRPLVTRL KGAAKEDGLE ERSKLWVDCD SFWGQGPGKP  420
LREAVGECAD YFIAISNGDA GVEPPATLIX PSNDVPRFKI EDPAQREPAL RRARSVEKLV  480
LRAIHGWIFK LSSRSAGFAR AESYISVDIA TNVARAVSQG HEWSNVVSPP IVYHTLAMKM  540
DVPLWFAGVK IVDRPEDDVM AARQEATVLR VVECWTDALW CGQWADGNRM KQERLSRLVD  600
CLRALLSXCM WIMRMGGDDD RXHYEACLYA SMVAKPTMMA AGSYIFNWRR HIVDSANLVL  660
DRIGKAHLTL GDYLHCIPEW CDCGLLFGYN AALKNAAEAA KHGWVGSGPA AEEDGDEGS