PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | GBG93385.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 219aa MW: 23964.4 Da PI: 10.8246 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 48 | 2.6e-15 | 122 | 180 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++++r+ +NRe+ArrsR+RK++ ++eL++++ +L a N+++ + ++ k++a+l+ e+ GBG93385.1 122 RKQKRMLSNRESARRSRLRKQQHLDELKQEATSLRAANTEMMGRFNMAAKQYAYLTEEN 180 79*****************************************************9998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 219 aa Download sequence |
MSKVNGTTIA GRQAVPSLIG KSSTPSPPQS FHPSASSPSS QSKHYFGGGG SQPSAGATNY 60 HHHPHQYPHQ YHQQGGSASR TTTTTTTTTT TTNSHSPPNP ALVELVATSK LPSDDEAAVE 120 ERKQKRMLSN RESARRSRLR KQQHLDELKQ EATSLRAANT EMMGRFNMAA KQYAYLTEEN 180 RLLRTHATEL SRTLHRLHQS TSGSTVTGLH HPHSIGLTR |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 135 | 141 | RRSRLRK |
2 | 135 | 142 | RRSRLRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G18160.1 | 7e-19 | bZIP family protein |