PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG90713.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 477aa    MW: 51625.3 Da    PI: 6.7906
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG90713.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix29.71.7e-09263337269
    trihelix   2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 
                 W+   + aL++a+r        +++++   k +  +We+v  ++++ g++r ++ C  kw+nl +++kk+ + ++
  GBG90713.1 263 WSVGDTAALVRAKRdqdlyiaGLGTSFTHMKTAVWKWEDVRVRLQAMGVTRDAVDCGRKWDNLMQQFKKVHKFQN 337
                 8888999999999977777767777888889**************************************987665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 477 aa     Download sequence    
MARRLPNGRP AGTSGGSINR QRSTGSVAKQ PYDPRLYAHF PSHEIPLSSS DDEGGEARSP  60
TLPLGSGSTQ DWVATQSCGG RGVETPWSYT SLLNEGLCDD DGDAAVHLSF HLSSSSGAAA  120
THRVGIVRKT RKAMSEAHET AICLNRFTTV EVIVITRRRA SVEDSVRVWA ECRQELHRGE  180
METITRGVQR LHVDEVEDAA VDEGQGCGDV DGEDGCKSDD LPDIRPLGRR ATRGGSGAKK  240
GPAMKPRQMK NMDDDGEGGR NFWSVGDTAA LVRAKRDQDL YIAGLGTSFT HMKTAVWKWE  300
DVRVRLQAMG VTRDAVDCGR KWDNLMQQFK KVHKFQNLSG GKDYFRLALR ERRSEGFSFV  360
MDRSEYDEMV AMTKGDRTIH PANLADTGAA GGVQMPAGAG GDGGTMGADG GGETTDEEQE  420
STKDSSFSAG SGGGYGKRKN MRQQTFEAVA DVMEKHGALM ASTMDSASKR QCSVMSR