PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG90431.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 475aa MW: 49712.8 Da PI: 7.9234

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG90431.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	37.8	4.9e-12	212	292	4	79
trihelix 4 kqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79 ++e+l+L+++r e+ e+++ +++ +lW+e+sk++ + gf+r+ +Ck++w+ + yk i +++k+ s+++s + GBG90431.1 212 DDETLLLLTLRCaykaareEDSEAYGIARSGTKLWKEISKNLIAAGFNRTRDMCKNRWKYVYCNYKDIIDNDKR--SGRKSYW 292 68899999888744444446666666678*****************************************9998..3444444 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MKDHGHWSAI FQQLCSRQFT NVEGTRSTGR SIGFRIDGVE EGCAWRGCSS FIGGGGRRST 60 SSKDGVQDEH AAMATTEVSN VSAMACRAGN NNLSNARAAV GDLNYPPAPP VMAGAMSSGG 120 CRGGSGQSFV EDRLELEDIV GQEECGGDGI CAGGVCNAGG DQIIVCGVAQ ADGTPLTAAD 180 ATAGEQDGGV QKAKSAPKKA TKKSGKTPNK RDDETLLLLT LRCAYKAARE EDSEAYGIAR 240 SGTKLWKEIS KNLIAAGFNR TRDMCKNRWK YVYCNYKDII DNDKRSGRKS YWDMEVETRV 300 QNQLDFIMRR AWFDHIDKFD KRTQAINPED ITESHESGGR GGSMVSGAGG TLNSEGRQSG 360 DVETTPKRDP GSSVCAGKDG TSAGGSGGGS GGGSAGGSAG NANTGQDGMS PGAEPALRRD 420 SRSSVITGQD GTRAGGSAGN ASTPAQLPTL GKRKRCAQTA REQSVQTITS AMREQ

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MKDHGHWSAI FQQLCSRQFT NVEGTRSTGR SIGFRIDGVE EGCAWRGCSS FIGGGGRRST  60
SSKDGVQDEH AAMATTEVSN VSAMACRAGN NNLSNARAAV GDLNYPPAPP VMAGAMSSGG  120
CRGGSGQSFV EDRLELEDIV GQEECGGDGI CAGGVCNAGG DQIIVCGVAQ ADGTPLTAAD  180
ATAGEQDGGV QKAKSAPKKA TKKSGKTPNK RDDETLLLLT LRCAYKAARE EDSEAYGIAR  240
SGTKLWKEIS KNLIAAGFNR TRDMCKNRWK YVYCNYKDII DNDKRSGRKS YWDMEVETRV  300
QNQLDFIMRR AWFDHIDKFD KRTQAINPED ITESHESGGR GGSMVSGAGG TLNSEGRQSG  360
DVETTPKRDP GSSVCAGKDG TSAGGSGGGS GGGSAGGSAG NANTGQDGMS PGAEPALRRD  420
SRSSVITGQD GTRAGGSAGN ASTPAQLPTL GKRKRCAQTA REQSVQTITS AMREQ