PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG88863.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 462aa    MW: 50621.5 Da    PI: 8.3483
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG88863.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix26.61.6e-08375446266
    trihelix   2 WtkqevlaLiearremeerlrrg.......klkkplWeevskkmrergferspkqCkekwenlnkrykkike 66 
                 W+ ++  aLi+a+r+ + +l+++       ++++  W +v +++ + g+ r   +C +kw+n  +++kk+ +
  GBG88863.1 375 WSLDHMVALIRAKRDQDAQLQATghafarmRSREWIWLDVRERLLKAGVDRPVDKCGKKWDNRMQEFKKMHT 446
                 99************99999996523333336999***********************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 462 aa     Download sequence    
MAGVIRKLPV VVLVVILLLV VVFVQVCILG RLPSHSRRKQ GVRKSVAMDG RRPNVATLSD  60
TYPSHRPAIS TGVDTRAAGP SPYEGLPPHK QPLPDSDEGE ADVDVSNTIP LGSGSTQEWT  120
GSQLFDRRGA KYRQSFTSLL HEGAQEEERL PLVDLTFGLQ SGSPSFATHT VLVNPHPNDD  180
GGQVTLVGRG TRGSSAPKET SEKTRERPRV QATSGPSIPC TTAGRPEWMN PPPAFSRGRD  240
TVPRPVERGV SEEDFPFEGA RGDGRRVWKE SRQELGRQQE ESITQGVQRL RVGERAGQAD  300
AVGGGGDVWT DGDEVECDAE EDDSGDVFPL RAPNMGGRGG RGRASTNGGR RRKRPSATSA  360
DAEGEGDGEG GRNFWSLDHM VALIRAKRDQ DAQLQATGHA FARMRSREWI WLDVRERLLK  420
AGVDRPVDKC GKKWDNRMQE FKKMHTFMGM SGKEDFFQLT SQ