PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG88446.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 571aa MW: 63858 Da PI: 9.7615

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG88446.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	26.1	2.2e-08	79	152	2	68
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikege 68 W+ +e ++L++ +re e +l r + k+ +W++++k+m+ g + + +kw+nl + ykki++ + GBG88446.1 79 WSPEEQMQLVRCKREQEMHLAglghnygRMRTKEWKWDDIAKRMANAGRPKDADDYMNKWDNLFQNYKKIQRFQ 152 9***********66666553333333778************************************98755 PP

Sequence ? help Back to Top
Protein Sequence Length: 571 aa Download sequence
MRAHSDGGDD DGGRGDDADE RFTEDVEAGD ANDDIPIRPL GKTGVRGRGR NGGVVRGRSV 60 GRRGRGGVSD DGGKSATYWS PEEQMQLVRC KREQEMHLAG LGHNYGRMRT KEWKWDDIAK 120 RMANAGRPKD ADDYMNKWDN LFQNYKKIQR FQNASGRPDF FGLSNEERKD HNFKFRMERA 180 LYNEIHAGML GNHTIFPPNV ADTGSPDEVE LPRRGAGAGD SVGSEATREG FPEERSSTRD 240 ATSWAGGGKR KNACRQALES IADVMDRHDE LMSSTIESSS KRQCSIFTRQ CDILEQEVAV 300 QKAHYVASDE MQRTMCHALM EIVAAIRGRI VVLLSTTCTS SSASHGGQIF CVEGVSVVVT 360 PQQHERHIYR QIDNTSNSGR RSTSRIPLIR SHRQARLQRS HRSMSTRGNT CGKKRGVVPN 420 NSQGQGRGRR HALKVKRVHW EDASARVPRR GAQGWARAVE GDYDEEFTMA EEQAEAITSA 480 VRESGRQRSF DQSAWKRMLT PPPEAQQLRA REMRTEKVVV VDLGGEDDEP LDRRRMRTRT 540 TATPPPMVTT HAAVNERPVS GRLPATPSQP R

Sequence ? help Back to Top

Protein Sequence Length: 571 aa Download sequence

MRAHSDGGDD DGGRGDDADE RFTEDVEAGD ANDDIPIRPL GKTGVRGRGR NGGVVRGRSV  60
GRRGRGGVSD DGGKSATYWS PEEQMQLVRC KREQEMHLAG LGHNYGRMRT KEWKWDDIAK  120
RMANAGRPKD ADDYMNKWDN LFQNYKKIQR FQNASGRPDF FGLSNEERKD HNFKFRMERA  180
LYNEIHAGML GNHTIFPPNV ADTGSPDEVE LPRRGAGAGD SVGSEATREG FPEERSSTRD  240
ATSWAGGGKR KNACRQALES IADVMDRHDE LMSSTIESSS KRQCSIFTRQ CDILEQEVAV  300
QKAHYVASDE MQRTMCHALM EIVAAIRGRI VVLLSTTCTS SSASHGGQIF CVEGVSVVVT  360
PQQHERHIYR QIDNTSNSGR RSTSRIPLIR SHRQARLQRS HRSMSTRGNT CGKKRGVVPN  420
NSQGQGRGRR HALKVKRVHW EDASARVPRR GAQGWARAVE GDYDEEFTMA EEQAEAITSA  480
VRESGRQRSF DQSAWKRMLT PPPEAQQLRA REMRTEKVVV VDLGGEDDEP LDRRRMRTRT  540
TATPPPMVTT HAAVNERPVS GRLPATPSQP R