PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG87595.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 917aa MW: 102136 Da PI: 9.0919

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG87595.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	26	2.4e-08	8	59	19	70
trihelix 19 erlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 ++++r + k+ +W++++k+m+ g + C +kw+nl + ykki++ ++ GBG87595.1 8 HNYGRMRTKEWKWDDIAKRMANAGRPKDVDDCMKKWDNLFQNYKKIERFQNA 59 677888999************************************9987665 PP

Sequence ? help Back to Top
Protein Sequence Length: 917 aa Download sequence
MHLAGLGHNY GRMRTKEWKW DDIAKRMANA GRPKDVDDCM KKWDNLFQNY KKIERFQNAN 60 GQADFFRISN EERKEHNFKF RMESVLYNEI HAGMLGNHTI FPPNVADTGS PDGVQLPRQG 120 AVGGEFVGSE AGGDGCPEEC SAARDSDNNP GSGAGGGKRK YVRQQALESI VDVMDRHGEL 180 MSTTIDSSSK RQCSIFTRQC DKLEQEVAVQ KAHYAASDET QRMMCHTLME IAATIRGRSS 240 TVAEDHRRRL CSHLVTWRIF AGVVVLLSYT WTSTVNHSIA EHSHRRSSVL LAVNLFAAER 300 SRRALRPSVV HVYVVVYVPR RRNLLRRGGI RPRQAAATRE TFFSPDRWDF KRRSTKRFPL 360 IRSDHQARLK RSRRSMSTRG SARGKKRDSV PDDTQGQRRG RRHVPKAKRA RLDDASASMP 420 PRRAQGWAAA AEGDYDDSST REEEQAEATA SVVRESAWQR SPDQTPSKRM LTPPPEAQQL 480 RASDTQTEKV VVVDLGGDDD EPLEKNRLRT IAQGIPTSAA TSRAAVDERR LLVGGESAGA 540 AGAGASGAVA PIATAREEAP VVVTAREEAH GENKIDRDGG EAGSNRVRRG VMTKDLVDRV 600 VLWVDDKAFG TTGEGQRLYN IVHETREYFV AIVSGLPTPV VPRSVVLPKS STKVARITDP 660 SQLQQAISRA AAVENIALRI LHGWIFKSGN RPRGYNVAFQ YSLESAATDI ARAMWYGEEW 720 CNVVSAVVCA HTIDLSMDLP LWFAGANIED RPKDDDMAAY QEFTVICVAH AFHGAVQMGA 780 HIDGDFISYD RLCRVADCFR LLLAACMWIM SMAGDDPRSH YEAFYFADLV AKPTLVTSMH 840 RSFDHRRFVV RATKVVTERL GKAKATFGEY KDYIPGWAPC DIGFRHDASI MGQEDAKKLD 900 WLGQVCLVCP SLESTTS

Sequence ? help Back to Top

Protein Sequence Length: 917 aa Download sequence

MHLAGLGHNY GRMRTKEWKW DDIAKRMANA GRPKDVDDCM KKWDNLFQNY KKIERFQNAN  60
GQADFFRISN EERKEHNFKF RMESVLYNEI HAGMLGNHTI FPPNVADTGS PDGVQLPRQG  120
AVGGEFVGSE AGGDGCPEEC SAARDSDNNP GSGAGGGKRK YVRQQALESI VDVMDRHGEL  180
MSTTIDSSSK RQCSIFTRQC DKLEQEVAVQ KAHYAASDET QRMMCHTLME IAATIRGRSS  240
TVAEDHRRRL CSHLVTWRIF AGVVVLLSYT WTSTVNHSIA EHSHRRSSVL LAVNLFAAER  300
SRRALRPSVV HVYVVVYVPR RRNLLRRGGI RPRQAAATRE TFFSPDRWDF KRRSTKRFPL  360
IRSDHQARLK RSRRSMSTRG SARGKKRDSV PDDTQGQRRG RRHVPKAKRA RLDDASASMP  420
PRRAQGWAAA AEGDYDDSST REEEQAEATA SVVRESAWQR SPDQTPSKRM LTPPPEAQQL  480
RASDTQTEKV VVVDLGGDDD EPLEKNRLRT IAQGIPTSAA TSRAAVDERR LLVGGESAGA  540
AGAGASGAVA PIATAREEAP VVVTAREEAH GENKIDRDGG EAGSNRVRRG VMTKDLVDRV  600
VLWVDDKAFG TTGEGQRLYN IVHETREYFV AIVSGLPTPV VPRSVVLPKS STKVARITDP  660
SQLQQAISRA AAVENIALRI LHGWIFKSGN RPRGYNVAFQ YSLESAATDI ARAMWYGEEW  720
CNVVSAVVCA HTIDLSMDLP LWFAGANIED RPKDDDMAAY QEFTVICVAH AFHGAVQMGA  780
HIDGDFISYD RLCRVADCFR LLLAACMWIM SMAGDDPRSH YEAFYFADLV AKPTLVTSMH  840
RSFDHRRFVV RATKVVTERL GKAKATFGEY KDYIPGWAPC DIGFRHDASI MGQEDAKKLD  900
WLGQVCLVCP SLESTTS