PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG86649.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 828aa MW: 89028.3 Da PI: 8.3509

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG86649.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	27.1	1.1e-08	324	399	2	69
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegek 69 Wt ++ aL++a+r ++++++r k k +W+++ +++ + g+ +r++ C +kw+nl +++k + + ++ GBG86649.1 324 WTVEHMIALVRAKRdqdlhlaGLGHNMGRMKTKTWKWADIESRLVQMGVpTRKADDCGKKWDNLYMQFKIVHKFMG 399 9***********77777777778888999**************99****************9877655 PP

Sequence ? help Back to Top
Protein Sequence Length: 828 aa Download sequence
MADLCRRLPL LLLAVVLLLA IVVFHICILG CVPGRKQRWR TTKATGKMEK VQTKRTMSVG 60 AGGLSRQRCS SAEGGRRPYD PTLYSHLPSH EIPLPPSDDD SDEPRSSTVP LGSGSTQDWM 120 GSQLYRQPST PTYTDLLEGR TPVGYDGGLV DLSFGLRSGS RQDVTHTILV NPRSASNHTA 180 PSVGPCGLPD TRGRGSGQSG DKRGLVSRGR AAVGTADVRA EGTRTGGSTT AGGAVHRGGD 240 DADGYAAEVA GREVWDDYRR QSRDGGNDND DDDDDGEMEI RPLGMKRGGP RATRKSSEPR 300 AGRRGKKTEG DASAGDGAKS RDFWTVEHMI ALVRAKRDQD LHLAGLGHNM GRMKTKTWKW 360 ADIESRLVQM GVPTRKADDC GKKWDNLYMQ FKIVHKFMGE SGKPDFFTLA PRERKEQGFN 420 FRMDERVYSD MMAMSKGDHT IHPTNLADTG AAGGVQLPGR TGGRNDSGGS GGCGDGQDDD 480 QGSTRNSSFS GGAVGGCGKR KNVRKQTFDT IADVMKDHGS LMATTVDSAS KKQCSILTRQ 540 CNILERELEV QKEHYVKADQ ANLLISEHTA DFQPEEVVMV DAQGTSEAPR LGFGRDGLTR 600 EQLSAVKQSI VVGAAGASQR TPKAAGVVIT EVRVPRQLPE ATGQGQPCQV LPLQQLGASV 660 GGRAQPAQKG DATKIGTRTA AADHSGRTGV AEGAGEERVD DVRHDEGRRD GKREDDDDED 720 RPLVTRLKGA AKEDESYITV DIATDVARAV WQGQESSNVV SPALVYHTLG MKMDVPLWFA 780 GVKIVDGPGR RHGGAAGGDS SSHRGMLDRR TVVWTMGGRR ARETGEVV

Sequence ? help Back to Top

Protein Sequence Length: 828 aa Download sequence

MADLCRRLPL LLLAVVLLLA IVVFHICILG CVPGRKQRWR TTKATGKMEK VQTKRTMSVG  60
AGGLSRQRCS SAEGGRRPYD PTLYSHLPSH EIPLPPSDDD SDEPRSSTVP LGSGSTQDWM  120
GSQLYRQPST PTYTDLLEGR TPVGYDGGLV DLSFGLRSGS RQDVTHTILV NPRSASNHTA  180
PSVGPCGLPD TRGRGSGQSG DKRGLVSRGR AAVGTADVRA EGTRTGGSTT AGGAVHRGGD  240
DADGYAAEVA GREVWDDYRR QSRDGGNDND DDDDDGEMEI RPLGMKRGGP RATRKSSEPR  300
AGRRGKKTEG DASAGDGAKS RDFWTVEHMI ALVRAKRDQD LHLAGLGHNM GRMKTKTWKW  360
ADIESRLVQM GVPTRKADDC GKKWDNLYMQ FKIVHKFMGE SGKPDFFTLA PRERKEQGFN  420
FRMDERVYSD MMAMSKGDHT IHPTNLADTG AAGGVQLPGR TGGRNDSGGS GGCGDGQDDD  480
QGSTRNSSFS GGAVGGCGKR KNVRKQTFDT IADVMKDHGS LMATTVDSAS KKQCSILTRQ  540
CNILERELEV QKEHYVKADQ ANLLISEHTA DFQPEEVVMV DAQGTSEAPR LGFGRDGLTR  600
EQLSAVKQSI VVGAAGASQR TPKAAGVVIT EVRVPRQLPE ATGQGQPCQV LPLQQLGASV  660
GGRAQPAQKG DATKIGTRTA AADHSGRTGV AEGAGEERVD DVRHDEGRRD GKREDDDDED  720
RPLVTRLKGA AKEDESYITV DIATDVARAV WQGQESSNVV SPALVYHTLG MKMDVPLWFA  780
GVKIVDGPGR RHGGAAGGDS SSHRGMLDRR TVVWTMGGRR ARETGEVV