PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | GBG85980.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 1682aa MW: 170770 Da PI: 5.0049 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.3 | 5.1e-11 | 825 | 882 | 2 | 59 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 +++k++ r+ +NRe+A+ sRqRKk +++ Le++ ++ a +L ++ +l+ +l GBG85980.1 825 EADKKQARLLRNRESAQLSRQRKKVYVDDLENRLRTMAATIAELNATIAHLTADNVAL 882 689************************************9999999999998766555 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 1682 aa Download sequence |
MEEVCLEKQE GEGDAFRFCA AELSQTDGDR DRDGDARESI GAAPSAAEAV AVGVPADDLL 60 SFAETMISCP EEDGDLLSMG FADGFSEPPA AAAAAAEVVA STVDISRQFE LMEKGEGDEG 120 DDLWGIMEAV DMSPEGDAYG MDDEWLCLLA DSASAGVEDE QRSSLVPLTN PLDSGTEDKP 180 MDIEGEGGDL RSEGFVGSHL VNNASLLTAA SGSSLCSSLP SRDSCLGICI PVDPAPSRVI 240 DGDVLYDGSG ARTVSPAGIA PQPVRVVGGG GDAAPLNPPP DVSSAPVKFP PSPSLVPHAT 300 VDGLRFDGDP KGATATAAGK GGTSAVRSST AEAQNCKLST DSAEARNCKI LTDCVERPVP 360 VISPPEQPLY GSDSSSRHER DCSEAEENAL SGRAESPREC SQIARKTNAD DALVDERMGD 420 AAAADGSKNS SLEAVHLVAS DKSAPDPRSS GSDFLSTAAL ASDLTCAQSS METAAQSSMV 480 IATSRHLLAP SDGGTSQSPA VEQGRVAAFQ GGLGAHSFSP CMLPDSAAAA PRWSMTRAAA 540 ACTGELVDTA SPRSGRSVAC ALPPAAGASP QSPPAQDTSG KDAMVRRGDG AAGGGEKTTA 600 QGLPGKFPPS ETSAAGSGDG FVNDTRIRAP LATKATSAKS GRGGGAQGAG YGMAKRSNDL 660 SAAAAGGGER RTSPASSERN ASSPETCRSG GGSAVGATSS LCSRDSGAGD DSGNDEQQFS 720 AHGDERHAGP WQERECSRGI GLDRDQQQLE QQQQQQQEQQ QQQHQQQRED RRSSSSSSTS 780 VLNPSSPEGG EGVGQGEIAT AMVDYNDGGG GGENSDEGVK SANGEADKKQ ARLLRNRESA 840 QLSRQRKKVY VDDLENRLRT MAATIAELNA TIAHLTADNV ALRRQLGYFY PAPPGGGAPP 900 AGIAAAGGPI IAGGGVGSMC GAAQVAHMYG GSGAPMMLPR HPGVMPPLGV ASMFGHGGQA 960 PPIPIPRWPS HRAAAAASAA ATGSKKQKGK RSASREAEKE ASTSASAATA TAAAPTSDRE 1020 KKRTKRDSRA VLTLSLFCFV LVFVPFGGLW DWSPLSPFAA LPESRGGTYI PPGGRGGGGV 1080 GVGSEHDGGR ILVDSGGGGG GRPPGGRVLM GLGEESGPGD PPGDRREEGE GRQDEGGEMW 1140 RRGNATILQP PVPLERAMFL SGGHSPTVKP SSSSARDAAE KESLLILNRT VIGRNTEIVP 1200 ASLIVPRGHE IVRVYGNLII QSVMAGDKAA WGHREGNGEA KGGGGREGGG MPGNAMSDTD 1260 RHQLKAMASL SINGGGDGGA VAMNYPTSGN ALPASASERS GQGQSSAGGR PVAPGQLGSS 1320 SGSGLKGGEE RRGQASSRRH HHHLDHYPSH HHHYENTWIF GPGGLSGPVL TSGVCTELFQ 1380 FETSSSSIVP DVVVGTSTEE EEAGQGGAGA GGSGTISWKK AMEGRVAAMA ATEAARRAAA 1440 VGSGGSVRMP TTGTIEKAEA GNGDDLNLTE AMGQTQGKHG YYDYGRKGGR CVKDKRVKPL 1500 PSASAGVNAT AVAMEKVANG GRRANGSQYE DRCTREDALA DVRVGARSRG GGEVGVNGSD 1560 RRSMEGEEDP TGRSFGYGGS RTDKSLPSTM VVSVLLPSMQ PGEDSAAGGG RGGGGSSTGK 1620 NGGSGSGPGK LTQIFVVVLV NSVKYVTYSC LLPTLSATAA AMAGPTAAAG AAAAAAAGAG 1680 VL |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 1073 | 1079 | GGRGGGG |
2 | 1242 | 1248 | GGRGGGG |
3 | 1243 | 1249 | GGRGGGG |
4 | 1244 | 1250 | GGRGGGG |
5 | 1608 | 1614 | GGRGGGG |
6 | 1609 | 1615 | GGRGGGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G40950.1 | 1e-17 | bZIP family protein |