PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG85961.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family HSF
Protein Properties Length: 728aa    MW: 78568.9 Da    PI: 4.2417
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG85961.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind116.81.3e-36941862103
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+y+++ed+++++++sw+++++sfvv+d+ e+a++vLpkyFkh+nf+SFvRQLn+YgF+kv+ ++         weF +k+F +g+k+ l++i+
    GBG85961.1  94 FLTKTYDMVEDPATDDIVSWTQSNTSFVVWDPAELARDVLPKYFKHNNFSSFVRQLNTYGFRKVDPDQ---------WEFYNKWFVRGQKHFLKNIH 181
                   9****************************************************************999.........******************** PP

                   XXXXX CS
  HSF_DNA-bind  99 rkkse 103
                   r+k e
    GBG85961.1 182 RRKPE 186
                   **976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 728 aa     Download sequence    
MDPNAGVVCH SNGNDQENPQ EPSTHPKSPP KSPDEETVGT PEFGLQTGEQ PAPIGSSQPP  60
STGQDSVLPS QPVDNTPPPT PIDSLSSSNL PPPFLTKTYD MVEDPATDDI VSWTQSNTSF  120
VVWDPAELAR DVLPKYFKHN NFSSFVRQLN TYGFRKVDPD QWEFYNKWFV RGQKHFLKNI  180
HRRKPERSQL QQHGMGPSSV GACIEVGKFG LEGDIEQLKR DKNVLMLELV RLRRNQELMD  240
NRLQVANSRL GVMEQQQQTV MAFLAEFVKN PSFLAQFVQR NDKAQPRITV RKKRRLPPKQ  300
NGGLNGPADA NSGQLIHYHQ FQPMAQDTTR ASLTELTNDS DITSTPMDTA EEGIGQPDRN  360
VSNSALESFL RDLNAHLAKP SNHLRTSGLT LTEVGQLTVP ATMMPTLSNG SPEAPVAGNH  420
QETASGMPAG MLPRDGSAAH VPPPPDSTSS ITNGPELKQE YTATAVGAGP LSSGGNLMGQ  480
LVTEPLPEVS TVVNEALAVP VANGGRPVAA GEGALICATS DASPSPIDQD LLLEDLGEGL  540
MGGEGLEVMN LLRVEEGDQQ ARDGAEADHV HGTTVGEVEM DAMNLLRVEE DDQQVRDGAE  600
AARVHGTMVG EVDMGMDEEQ ESNAGVSNAV TLFDDASFWA NLFANHSEDE DSALPLSIDD  660
GAKTEGVGSA MGESTAAARG DMIDSSEIVD QDGMEEGQTL WWLPSQVYSD QLDNIVEQMG  720
QLAPLNPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17750.12e-84HSF family protein