PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG85309.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

C2H2

Protein Properties

Length: 798aa MW: 88271.4 Da PI: 9.7249

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG85309.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13	0.00031	356	379	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C C+k F + +L rHirt H GBG85309.1 356 FTCCLCSKGFASALDLDRHIRTyH 379 89********************97 PP
2	zf-C2H2	14	0.00015	680	701	1	22
EEETTTTEEESSHHHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt 22 ++Cp Cg+ F + + L+rH + GBG85309.1 680 FTCPVCGEGFATEMGLVRHGEL 701 89*****************665 PP

Sequence ? help Back to Top
Protein Sequence Length: 798 aa Download sequence
MDRLEWVLSY CLRVPRRLLD DAISAETEGK GSENGIEEAL AAKQWRETGG SGGEELAGSR 60 RSAREGLRIV PRLLARRTRI LRTDGGGAAA ARDGSRGGWS SSSSLANGAK ERVSRSLSLS 120 PSPSPKPLNT AGGAARIGSM VLAVVENSKG PSVDEVLEAK KKLFARTPFS KASTTVSGRR 180 RIMQAEGFPK GWKILIGWNS KYGVLQLYRH FMSPEGRYFH SRKSALRSLQ EMGSKRPVPV 240 KEDEAGRLSA KQSAALVLKE ENGNGKRVAI QNFKKGKKMK GVGLFICDIC RKQFTHLRGW 300 SGHRHKHSQE IAKQKGAQRK RYLLEEPIDI DEEQDDGRDT LGGERPQPRT RKCFLFTCCL 360 CSKGFASALD LDRHIRTYHH CGEEEAEPVV KRESRSIKGR LGEGQLHEDE QCVRKDGKNS 420 EGLACYRLSN SANKLGQCRV NEECHKSIGN NRRETEEDGQ HEAEGQLCFG PEEAEQLRQG 480 DPGCAVMRTD QRLADVVYVD TLKDQDTALV KKRMEDGAED DHTSEVRLVN GRDFWNCQVG 540 KKRAWNEDVA HGKQQSARPM VKQAPTGRKR SRGRKEADGN GVWRDEKSRI GAGVVRHCQG 600 RVVTSTQEGV DLGSTGMVVG ASEENERFSP REFVCPVCFA GFSRPAALGV HVGIHLPAAF 660 HSSPHSSQRG SGATPRGKDF TCPVCGEGFA TEMGLVRHGE LYHVVTLKRS HQSAFTRFGG 720 EIIDIPSQVM LRRKSDAPMV SGRANLQDAP SSSSEKMKDM TTDEDLNSPE QQQRQQSKKP 780 IFHSTYEVAR SPLASWVH

Sequence ? help Back to Top

Protein Sequence Length: 798 aa Download sequence

MDRLEWVLSY CLRVPRRLLD DAISAETEGK GSENGIEEAL AAKQWRETGG SGGEELAGSR  60
RSAREGLRIV PRLLARRTRI LRTDGGGAAA ARDGSRGGWS SSSSLANGAK ERVSRSLSLS  120
PSPSPKPLNT AGGAARIGSM VLAVVENSKG PSVDEVLEAK KKLFARTPFS KASTTVSGRR  180
RIMQAEGFPK GWKILIGWNS KYGVLQLYRH FMSPEGRYFH SRKSALRSLQ EMGSKRPVPV  240
KEDEAGRLSA KQSAALVLKE ENGNGKRVAI QNFKKGKKMK GVGLFICDIC RKQFTHLRGW  300
SGHRHKHSQE IAKQKGAQRK RYLLEEPIDI DEEQDDGRDT LGGERPQPRT RKCFLFTCCL  360
CSKGFASALD LDRHIRTYHH CGEEEAEPVV KRESRSIKGR LGEGQLHEDE QCVRKDGKNS  420
EGLACYRLSN SANKLGQCRV NEECHKSIGN NRRETEEDGQ HEAEGQLCFG PEEAEQLRQG  480
DPGCAVMRTD QRLADVVYVD TLKDQDTALV KKRMEDGAED DHTSEVRLVN GRDFWNCQVG  540
KKRAWNEDVA HGKQQSARPM VKQAPTGRKR SRGRKEADGN GVWRDEKSRI GAGVVRHCQG  600
RVVTSTQEGV DLGSTGMVVG ASEENERFSP REFVCPVCFA GFSRPAALGV HVGIHLPAAF  660
HSSPHSSQRG SGATPRGKDF TCPVCGEGFA TEMGLVRHGE LYHVVTLKRS HQSAFTRFGG  720
EIIDIPSQVM LRRKSDAPMV SGRANLQDAP SSSSEKMKDM TTDEDLNSPE QQQRQQSKKP  780
IFHSTYEVAR SPLASWVH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	567	573	GRKRSRG