PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG83677.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family C2H2
Protein Properties Length: 316aa    MW: 33348.9 Da    PI: 7.8156
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG83677.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.60.0018273295223
                 EETTTTEEESSHHHHHHHHHH.T CS
     zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                 +Cp C ++F ++  L+ H  t H
  GBG83677.1 273 VCPQCAQVFDDPVALVDHVETqH 295
                 6*****************99988 PP

Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MGSVAFPDLG KHCSVESCKL IDFLPFQCDK CDKVFCLEHR TYQNHQCANA NTGDVAVLVC  60
PMCAKSVRLV PNEDPNITWE RHVQDGCDPS NYERLTQKKA KCPVPGCKEV MTFSNKVTCK  120
ECHVEVCLKH RFGPDHNCRP GSSGSSSHGK GLSSLGEKFL KGLSTRLSSG MPSLSGAMAA  180
VPAKASAEYA SPVPGKSGLK LPSGLFTHPP ASAGGSEVCP QCSTTFGSVE ALIEHVESTH  240
PVAAPRAGGG AQGGAGSGLP RVPVARPIDN VNVCPQCAQV FDDPVALVDH VETQHKNSAA  300
GVRRSLEATA ERCRVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41835.16e-82C2H2 family protein