PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG82806.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family HB-other
Protein Properties Length: 286aa    MW: 32408.9 Da    PI: 5.7258
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG82806.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox26.41.2e-08214270154
                 TT--SS--HHHHHHHHHHHHH...SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
    Homeobox   1 rrkRttftkeqleeLeelFek...nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                 r+k+ ++ +  +++L+e  ++   ++yp++ e++e+A +  Lt +q+ +WF N+R +
  GBG82806.1 214 RKKKVALPAAAIHILKEWWKNhldKPYPTEMEKREMAVEGLLTMKQINYWFINQRKR 270
                 6778888888999999999955559******************************88 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MREGQQICEE VTRVCCRLEE EARLLAMELK LAGLPVCSAA AGTAAIVRLA DDCHCDSDYL  60
GLNPSCSGRD PLDKDENEGP DDRVQLDSER MPLMTTPDNE NVTASARCAA HQISRDPPYR  120
TALANQKLSN SAYSKCGTDE LGNLAASMFD GCVDVMDWSD MVCVEASQSL TPPKDACLEG  180
INYFLPVDSW ELKEQLKRRY GDYIQGLDME SVRRKKKVAL PAAAIHILKE WWKNHLDKPY  240
PTEMEKREMA VEGLLTMKQI NYWFINQRKR HWLKKAKRGE KPKHNE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1197217KRRYGDYIQGLDMESVRRKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25220.17e-22TALE family protein