PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GBG82614.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
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Family | Trihelix | ||||||||
Protein Properties | Length: 187aa MW: 20861.4 Da PI: 9.7903 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 36 | 1.9e-11 | 118 | 187 | 2 | 64 |
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykki 64 W+ +e ++L++ +re e +l + + k+ +W +++k+m+ +g + + C +kw+nl + ykki GBG82614.1 118 WSTDEQMLLVRCKREQEMHLAglghnygQMRTKERKWVDIAKRMANGGSPKDAHDCMKKWNNLFQNYKKI 187 **************77777663333222568*************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence |
MAGMKTRVVL PAAEGRRRPA TTEPSRRYDP SMYNHLPSWE TPLPPSSDDN CCGGDDADKG 60 FWEKVEAVDY DDENVVRPVG KTGGRGIGRS NRGGRGRSVG RGGRGGVTED GGKSATYWST 120 DEQMLLVRCK REQEMHLAGL GHNYGQMRTK ERKWVDIAKR MANGGSPKDA HDCMKKWNNL 180 FQNYKKI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33550.1 | 8e-06 | Trihelix family protein |