PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG82352.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 1421aa MW: 152925 Da PI: 5.6075

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG82352.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	31.2	5.8e-10	669	742	2	68
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikege 68 W+ +e +L++ +re e +l r + k+ +We+++k+m+ g + + C +kw+n+ + ykki++ GBG82352.1 669 WSPEEQIQLVRCKREQEMHLAglghnygRMRTKEWKWEDIAKRMANAGRPKDADDCMKKWDNIFQNYKKIQRFH 742 9999999999999966665553333333778**************************************98755 PP

Sequence ? help Back to Top
Protein Sequence Length: 1421 aa Download sequence
MLGGLSGSFA FSGHSYLGKC HRLEAERSLP FGDIANTGKS ERLPYIRGGN SQPFGLSSIT 60 DWTYNQDGGL RWMEGSQNPH LGIQADGTQQ CLTPRAVFGA FGEYVPPVTP LVTLRFGTAS 120 SNEDALREQL RLRAMAMVGC QVPSLGLARS GISPLIAQSL GAEDDVAGAG GSPNAVSSVS 180 HQAIHPSPHA VRPSVCYTPG KDCHPPADGG VVGSGHLYDR SSDEEEGRAG LVTPPANLRG 240 CGMDGGFSGS DGGIGGRTGS DGAHAAPARR LSVIEQAIRD VEFGNVDELL VLPVADTHGT 300 PTHGVGEGHG HASAAATSNA GDVEGANGER GGPQVDECDD TPIMEPNKDR WGEDETSQVR 360 VVPPMAGMQV RAVPPAAEGG RRPPTTEPSR RYNPSMYSHL PSWAREESEG DELPTFPLAS 420 ESTQLLSQTV LAGGSASNGR GEYTTLLQQG SGDDDDGGVD LRFGLSSGGG REASRTFIID 480 ADPSPRGVQQ SGNRHTELST LRGGTSVCVG VRPSSAGQQN GSSAPSADRL TSTCPERNAV 540 VVGSLRIGGT LHSMPKSTTP TQPDLRDDGT CRPAVRQTPS VENITRGVSN MRAHSDGGHD 600 DGGGGDDADG RFGEDVEAGD DDDDIPIRSL GKTGGRGRGR SRGAVRGRFV GRGGRGGVSD 660 DGGKSATYWS PEEQIQLVRC KREQEMHLAG LGHNYGRMRT KEWKWEDIAK RMANAGRPKD 720 ADDCMKKWDN IFQNYKKIQR FHNASGQPDF FWLSNEERKE HNFKFRMERA LYNEIHISMV 780 GNHTIFPPNI ADTESPDGVH LPRRGAGAGE SVGSEGAGQG LPEERSTTRD SDSNAANGAG 840 GGKRKNARQQ ALESIADVMD RHGELMSSTI ESSSKRQCSI FTRQCDILEQ EVAVHKAHYA 900 ASDETQRMMC HALLEIAAAI PGWAGEVEGD CDDEFTTEEE QAEATTSEVR ESDRQRSSDR 960 TASKRMQTPP HEAQQLHGRE TRTEKAPVVD LGGEDDEPLE RRRIRIRTTA TPPPEVVVRV 1020 ATNDRPVSGR LPATPSQPRQ RSDAGDGGSV QRVGGGEVVA DARAIGAQVA GVVGAVVSGN 1080 VGAVATGRED ATVVVTAREE ARGERKVERE AGEADSSRPR RSVMTKDLXD HVVLWVDDKA 1140 FWTTGEGRRL YNIHVRGQDR RPITVAQAIS HAAAVENVAL RILHGWGFKS ENRPRGYHVA 1200 FQHSLESFAT DIVHAMWYGE EWCEVVSPTI CTRTIDLSID LPLWFVGANI EDRPEDDDMA 1260 AHQESTVIRV PYAFRAAVQM GALVDGEFIT HDRLSRVADC FRLLLAACMW IMRMAEDDPR 1320 SRYDAFYFAN LVAKPSLIAA MHRSFDHQRS VVRAAKVATD RLGKVTATIG QYPNYIPQWA 1380 PCGIAFKHNA SITGPEDAKK LDWLGLGPLD DDNNDDGKDD A

Sequence ? help Back to Top

Protein Sequence Length: 1421 aa Download sequence

MLGGLSGSFA FSGHSYLGKC HRLEAERSLP FGDIANTGKS ERLPYIRGGN SQPFGLSSIT  60
DWTYNQDGGL RWMEGSQNPH LGIQADGTQQ CLTPRAVFGA FGEYVPPVTP LVTLRFGTAS  120
SNEDALREQL RLRAMAMVGC QVPSLGLARS GISPLIAQSL GAEDDVAGAG GSPNAVSSVS  180
HQAIHPSPHA VRPSVCYTPG KDCHPPADGG VVGSGHLYDR SSDEEEGRAG LVTPPANLRG  240
CGMDGGFSGS DGGIGGRTGS DGAHAAPARR LSVIEQAIRD VEFGNVDELL VLPVADTHGT  300
PTHGVGEGHG HASAAATSNA GDVEGANGER GGPQVDECDD TPIMEPNKDR WGEDETSQVR  360
VVPPMAGMQV RAVPPAAEGG RRPPTTEPSR RYNPSMYSHL PSWAREESEG DELPTFPLAS  420
ESTQLLSQTV LAGGSASNGR GEYTTLLQQG SGDDDDGGVD LRFGLSSGGG REASRTFIID  480
ADPSPRGVQQ SGNRHTELST LRGGTSVCVG VRPSSAGQQN GSSAPSADRL TSTCPERNAV  540
VVGSLRIGGT LHSMPKSTTP TQPDLRDDGT CRPAVRQTPS VENITRGVSN MRAHSDGGHD  600
DGGGGDDADG RFGEDVEAGD DDDDIPIRSL GKTGGRGRGR SRGAVRGRFV GRGGRGGVSD  660
DGGKSATYWS PEEQIQLVRC KREQEMHLAG LGHNYGRMRT KEWKWEDIAK RMANAGRPKD  720
ADDCMKKWDN IFQNYKKIQR FHNASGQPDF FWLSNEERKE HNFKFRMERA LYNEIHISMV  780
GNHTIFPPNI ADTESPDGVH LPRRGAGAGE SVGSEGAGQG LPEERSTTRD SDSNAANGAG  840
GGKRKNARQQ ALESIADVMD RHGELMSSTI ESSSKRQCSI FTRQCDILEQ EVAVHKAHYA  900
ASDETQRMMC HALLEIAAAI PGWAGEVEGD CDDEFTTEEE QAEATTSEVR ESDRQRSSDR  960
TASKRMQTPP HEAQQLHGRE TRTEKAPVVD LGGEDDEPLE RRRIRIRTTA TPPPEVVVRV  1020
ATNDRPVSGR LPATPSQPRQ RSDAGDGGSV QRVGGGEVVA DARAIGAQVA GVVGAVVSGN  1080
VGAVATGRED ATVVVTAREE ARGERKVERE AGEADSSRPR RSVMTKDLXD HVVLWVDDKA  1140
FWTTGEGRRL YNIHVRGQDR RPITVAQAIS HAAAVENVAL RILHGWGFKS ENRPRGYHVA  1200
FQHSLESFAT DIVHAMWYGE EWCEVVSPTI CTRTIDLSID LPLWFVGANI EDRPEDDDMA  1260
AHQESTVIRV PYAFRAAVQM GALVDGEFIT HDRLSRVADC FRLLLAACMW IMRMAEDDPR  1320
SRYDAFYFAN LVAKPSLIAA MHRSFDHQRS VVRAAKVATD RLGKVTATIG QYPNYIPQWA  1380
PCGIAFKHNA SITGPEDAKK LDWLGLGPLD DDNNDDGKDD A