PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG82273.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

C2H2

Protein Properties

Length: 1823aa MW: 202618 Da PI: 8.334

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG82273.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.9	0.00016	1623	1646	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++Cp Cg++F + L rH + H GBG82273.1 1623 FPCPVCGEPFATEQGLARHKELyH 1646 89*****************98777 PP

Sequence ? help Back to Top
Protein Sequence Length: 1823 aa Download sequence
MASDEKAIVV SVKASSSADN SNDNDNSNGN HLKGMTGMEV VKLDSVEDSV KFKQQLFASS 60 PFSRALISVS GKRRVIDAEG LPDGWKEVIG WSWKEGKMRL YRHFMSPHGG CFRSRKSAKM 120 AAERTNQSTS LKRSVPSSAS AQQEAIKKKE NLHGKGMSAA QMVTSKKPAD KRNSADGRGV 180 DNLALFVCEL CGKEFSNFGS WSGHRSMHSK ELAERRESGA ATSSTSAAPK QERLFFCLVC 240 EKLRFENAQT LVTHLREKHN WSANRSTPEA TGKKRGTYYG NGNGNGTAAA GGKEGRTLST 300 SKKSAQPNKV CESIRAIKQE LDAFPIQEEA SAQRNQGRDS SNRNQAACNA ENGSKPKGGK 360 ERETSATSQC QISSATSQCH VTVPDQQCHI SSARSQCHIR LSATSAVTSD TVPRKQCHIN 420 SATSDTVPRR QCHISSATSD TVPCKQCHVR QCHVSSATSA VPHQTVPRQQ CHVSNMTGLP 480 DQLASEPIAD YKKRVHAQLA AIEAEEQRQL AVKAAQLQAD EAATVEKLRL QAEADADAQA 540 RRKEAQALLQ RHEASSIEKL KYWHFEPNGD EPTPEEQHRE FMAKLVSRLV YTCNDLQSEL 600 ANLQRAVRNQ KTQHEDATRA LDTRVLDLEQ AVPGPAAGAS SSASSSRQLE ERVDHVVAML 660 GDISVFTQPA TISQRFELLD SKISQQQQTD HSHNNSSARP YKMPTFRIEK FDDYTHQDPV 720 VWWQGFTTEL GIHEVPDHLF ISALFINTKG GCQIWLNHMA TIHGVQVSDL YKVSWEDIIK 780 EWKKRFIVDD APTLAVNHIF TMAQGSTPTR DWLTDWQKIV ATPDLDLSFP HLRREFYNRS 840 CAALSLALGD REQYELVRDS SSSLQSSRTV EITSAATPAS SDGDQVAAVQ PRSNNKSRNN 900 GKAKSASQAG NGQPGQFPLV KFGLTEAEYK IRKEDRYKTA FKTHYGHFEW LVMPFGLTNA 960 PATFQAAMTT EFRHMLDRFV LIYLDDILVY SRSLDEHLEH LRTVLERLRQ AKYKANRDKC 1020 EFTRQELEYL GNYVTPQGIR PLADKIEALQ VWPEPTNTTD VRSFMGLAGY YQRFITGYSR 1080 IAAPMTRLQS PKVPFVFDDA ARRSFQALKT TMLMAPVLSI YDPTQPTRVT TDAFGYGIGA 1140 VLEQHDGDDW HPVEYFSHKV PPINSLDDAR KKELLAFVMA LKRWRHFLLG CRRFTWVTNN 1200 NPLTYFKTQD TVSSTIGRWM YFIDQFDFTP KHVPGLSNRA ADALSRRPDL CAMYSGKAHS 1260 KAGKGAAAQE NGEAKDMEIN GTREAVGQCL AVVVRQAKDH GAGEENKANV AVRQSRAGGR 1320 QKKTYESTPE YPGIYLCDVC RKRFNRFSAW NGHRSKHSRE IAKRKGNEAN RSAEAGDGSC 1380 KKPKRQVWLF SCSLCKSRFS AANLLHAHTE ICGRTLLPGD FSPRDRVNGK GRKSVSKKPD 1440 ASCKSKNMRP VIHGTPCQEG APSWQERRDS EKAKMDEDST NRNWQLVPYV SQVQCETSMS 1500 RDLVQWGRAE DVKPAGEWKD AAHEPPETDR AMRRDDDCPD RSTGVKGSGA AEADVEVKME 1560 PEDTPNMDYR KRKVGEFVCP ICIELFSTAA ELGEHMGSHP VGAWSCTFSP PKKCRNGGAG 1620 KGFPCPVCGE PFATEQGLAR HKELYHNAAV KQRMDAFMER NSCGKCELNS ASVDDRANGH 1680 HADCTVNNQE LDRRDTVEDD REQVSSWGTA AAVPCEKVVR GDADDGLGNG GACTLANSRC 1740 DPPPASRKNA KEVELTRVWW KTGEVVLEDN GACAICEKKA DSPATVMCDL CDQKFHISCL 1800 DPPLLNVPDS DWSCPICTVR TPP

Sequence ? help Back to Top

Protein Sequence Length: 1823 aa Download sequence

MASDEKAIVV SVKASSSADN SNDNDNSNGN HLKGMTGMEV VKLDSVEDSV KFKQQLFASS  60
PFSRALISVS GKRRVIDAEG LPDGWKEVIG WSWKEGKMRL YRHFMSPHGG CFRSRKSAKM  120
AAERTNQSTS LKRSVPSSAS AQQEAIKKKE NLHGKGMSAA QMVTSKKPAD KRNSADGRGV  180
DNLALFVCEL CGKEFSNFGS WSGHRSMHSK ELAERRESGA ATSSTSAAPK QERLFFCLVC  240
EKLRFENAQT LVTHLREKHN WSANRSTPEA TGKKRGTYYG NGNGNGTAAA GGKEGRTLST  300
SKKSAQPNKV CESIRAIKQE LDAFPIQEEA SAQRNQGRDS SNRNQAACNA ENGSKPKGGK  360
ERETSATSQC QISSATSQCH VTVPDQQCHI SSARSQCHIR LSATSAVTSD TVPRKQCHIN  420
SATSDTVPRR QCHISSATSD TVPCKQCHVR QCHVSSATSA VPHQTVPRQQ CHVSNMTGLP  480
DQLASEPIAD YKKRVHAQLA AIEAEEQRQL AVKAAQLQAD EAATVEKLRL QAEADADAQA  540
RRKEAQALLQ RHEASSIEKL KYWHFEPNGD EPTPEEQHRE FMAKLVSRLV YTCNDLQSEL  600
ANLQRAVRNQ KTQHEDATRA LDTRVLDLEQ AVPGPAAGAS SSASSSRQLE ERVDHVVAML  660
GDISVFTQPA TISQRFELLD SKISQQQQTD HSHNNSSARP YKMPTFRIEK FDDYTHQDPV  720
VWWQGFTTEL GIHEVPDHLF ISALFINTKG GCQIWLNHMA TIHGVQVSDL YKVSWEDIIK  780
EWKKRFIVDD APTLAVNHIF TMAQGSTPTR DWLTDWQKIV ATPDLDLSFP HLRREFYNRS  840
CAALSLALGD REQYELVRDS SSSLQSSRTV EITSAATPAS SDGDQVAAVQ PRSNNKSRNN  900
GKAKSASQAG NGQPGQFPLV KFGLTEAEYK IRKEDRYKTA FKTHYGHFEW LVMPFGLTNA  960
PATFQAAMTT EFRHMLDRFV LIYLDDILVY SRSLDEHLEH LRTVLERLRQ AKYKANRDKC  1020
EFTRQELEYL GNYVTPQGIR PLADKIEALQ VWPEPTNTTD VRSFMGLAGY YQRFITGYSR  1080
IAAPMTRLQS PKVPFVFDDA ARRSFQALKT TMLMAPVLSI YDPTQPTRVT TDAFGYGIGA  1140
VLEQHDGDDW HPVEYFSHKV PPINSLDDAR KKELLAFVMA LKRWRHFLLG CRRFTWVTNN  1200
NPLTYFKTQD TVSSTIGRWM YFIDQFDFTP KHVPGLSNRA ADALSRRPDL CAMYSGKAHS  1260
KAGKGAAAQE NGEAKDMEIN GTREAVGQCL AVVVRQAKDH GAGEENKANV AVRQSRAGGR  1320
QKKTYESTPE YPGIYLCDVC RKRFNRFSAW NGHRSKHSRE IAKRKGNEAN RSAEAGDGSC  1380
KKPKRQVWLF SCSLCKSRFS AANLLHAHTE ICGRTLLPGD FSPRDRVNGK GRKSVSKKPD  1440
ASCKSKNMRP VIHGTPCQEG APSWQERRDS EKAKMDEDST NRNWQLVPYV SQVQCETSMS  1500
RDLVQWGRAE DVKPAGEWKD AAHEPPETDR AMRRDDDCPD RSTGVKGSGA AEADVEVKME  1560
PEDTPNMDYR KRKVGEFVCP ICIELFSTAA ELGEHMGSHP VGAWSCTFSP PKKCRNGGAG  1620
KGFPCPVCGE PFATEQGLAR HKELYHNAAV KQRMDAFMER NSCGKCELNS ASVDDRANGH  1680
HADCTVNNQE LDRRDTVEDD REQVSSWGTA AAVPCEKVVR GDADDGLGNG GACTLANSRC  1740
DPPPASRKNA KEVELTRVWW KTGEVVLEDN GACAICEKKA DSPATVMCDL CDQKFHISCL  1800
DPPLLNVPDS DWSCPICTVR TPP