PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG81472.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 351aa MW: 36946.8 Da PI: 5.1849

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG81472.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	29.1	2.5e-09	118	166	22	70
trihelix 22 rrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 +r + +W++ ++mre+g++r+ + C++kw +l k+ ++i++ ++ GBG81472.1 118 QRHMTRCRRWQWTTDRMREEGYSRTGEDCRKKWAELVKKVREIRDAYEG 166 444577899*********************************9998776 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MRGSRASGVE RTGTAGEGYM HDTGGHWEFG GDGSEDGGGG GKDTASGATG LAAGTTGTPS 60 QEQAPTSVMP PSTGQCQKAP TPSAPLKKNG PWTLEERVKL ATVAVEDNAL MADAEGPQRH 120 MTRCRRWQWT TDRMREEGYS RTGEDCRKKW AELVKKVREI RDAYEGSGQQ SYFDLTTDER 180 RKKGVSLTFE NQFWDAMEWY RLKASVRCDN TMASEDLRGV GSMSGSEGGS EGGGTDASDG 240 SAKTRRTSLG KACGGESAAN MHGVASAIED STRAVCEGLD RAVGTLARAT TEGASMMAAC 300 MGDMVTGIGA VVGAMQQGNV VLEMLVGVMA GRGSQRGRGV DEGAETDPSL R

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MRGSRASGVE RTGTAGEGYM HDTGGHWEFG GDGSEDGGGG GKDTASGATG LAAGTTGTPS  60
QEQAPTSVMP PSTGQCQKAP TPSAPLKKNG PWTLEERVKL ATVAVEDNAL MADAEGPQRH  120
MTRCRRWQWT TDRMREEGYS RTGEDCRKKW AELVKKVREI RDAYEGSGQQ SYFDLTTDER  180
RKKGVSLTFE NQFWDAMEWY RLKASVRCDN TMASEDLRGV GSMSGSEGGS EGGGTDASDG  240
SAKTRRTSLG KACGGESAAN MHGVASAIED STRAVCEGLD RAVGTLARAT TEGASMMAAC  300
MGDMVTGIGA VVGAMQQGNV VLEMLVGVMA GRGSQRGRGV DEGAETDPSL R