PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GBG79389.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
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Family | HRT-like | ||||||||
Protein Properties | Length: 1052aa MW: 113457 Da PI: 8.303 | ||||||||
Description | HRT-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HRT-like | 45.4 | 1.4e-14 | 1011 | 1039 | 2 | 30 |
HRT-like 2 CGviledGsvCkrqPvkgRKRCeeHKGmR 30 CG++ +dG +C+++PvkgRKRC+eHKG+R GBG79389.1 1011 CGAKCGDGKICTTPPVKGRKRCAEHKGKR 1039 ****************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1052 aa Download sequence |
MEGGVGGGDG DLKGSPVPSS RRRLPPVCSP ATGGGQWKSP AQRPVVRAGG GRSVKQVQPH 60 AAIAEGSPRV RREQRLAEAD ESVTSVRQSP TTRTPRVRRE REIPTWNENI YERPTVDHSV 120 TSVRQSPPVK KAVSDKTGLS RAMRGRCAAA DRSSPDTQNK QENEANPQRQ RVKEKEKEEK 180 EEEEGEEEEE EEEEEEEEEE DEDFVEVERP RRRAIARPEE SIALRLRSAT ARATGRHAPS 240 RVGVRHSTTR KDLLTKLQKE GEGREEDGEE EEEAEEEDGE EEEKKKKVKM LDDVLRASDR 300 SFTGVDVIKI APLRAEDQHQ QYETEEEEGK AEEEEEEEEG AKVEAVVASL RPLAMGAVQL 360 KPVGSKRVTA GKDNDDDGEK ECERRVIEAG GSGGDATSAR AADCRSARVR ARAAPDTVAE 420 APAAAGRRVV GGNRKAYRAR NRQKEEAGGV ELGAQRPTVS SDDAQETAHP RSQTETISLA 480 QTETPTRRRS RRKSTDDRAV SVMSTPKSVC NQTGNPGREG GEGGEGGEGA DREGGEGGEG 540 GEAPLAQSVP KPINGSDSFL SRWSGHTPKW SSRATATTAA VGQSAPSLRL VREAYRKVLH 600 DSIFTDWKVL VGPQNWSDYA EGKEGGERYR TQNLPSYAGP GVYELGVARV GPELTTKSGI 660 PAPPSSFSLK MCSSPQAPRM RLIRSRDVVT TYIGQAENIR NRLQQYGRNG AHLQCSKKTC 720 GPAVKDEEDA GPGPGLQIFS EVFSEGLGVV FRWSSCGSKE EAEAAEAQLL ATFDYAWNKD 780 KNGHRRPADV YKKIAERKAS VLVGFRMPGW RRALFGRRKQ YAGVVVATVR PSASKEESKP 840 VRRRTSSPKI RERADEVHGL PDAGASLGPS PPPNRRRSAC VSQRELGDAL TKRTDEAGVV 900 VRDEGAVRPN GNARNLRSTA KGKVSKVDAE NTTPTGQGEQ GKVVVPWKNF KVLEEQSNAV 960 VESAVLAAKG NNLADITPRK AGGAGAGAGA GAGGGGPDMD AGKGPDLPLL CGAKCGDGKI 1020 CTTPPVKGRK RCAEHKGKRA ASASVTAANR GD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56780.1 | 1e-42 | HRT-like family protein |