PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG79323.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

bZIP

Protein Properties

Length: 619aa MW: 68117.8 Da PI: 5.3946

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG79323.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31	5.4e-10	407	445	25	63
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 25 kaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kae+eeL +v++L++eN++L+ el +l +e++kl +++ GBG79323.1 407 KAECEELGARVETLTNENMTLRTELTRLYEECKKLAADN 445 79*********************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 619 aa Download sequence
MRRKRRTATR KKRRSRRKRG RRRSAAMDEE EKVEDEEEEE EEEEGEQKEV DGEEEEEEEE 60 VEGKEEDEEE DEEEDGEEEE EEKEEEEERD ERDMEEGGGG YALVRGLEHV LGRGRWRAIS 120 AMSNSHNVLV AFHALEAASF ARSLARVAKC ENDMVAYSIL TPLSEFLSAL RECFADVTRG 180 LRASDNLQTV HTRQWKSVRA LKATIDELVT VPGHGVIEPL QLFYRAVLEK LHGHFFDKKQ 240 QPNMTYDTLS REVFAFEAQS MPVTTFWHKD LAKGKKWKGH TITSRVTAKD NLILTLDEGG 300 LEEVPYSEIE WGLDEEDSGT GQGRTYAAIA AGGRPQGRGR GEGQRGQTSG DKGQSGPGVG 360 GRGNRQAGGR GQGVKSRHGK SQVMVIVDRF SNEAFVRIVL RIECGLKAEC EELGARVETL 420 TNENMTLRTE LTRLYEECKK LAADNASLKD ELRYLRDDRS RSENGKGELQ QQQQQQATRG 480 NASGEMWKKT LLLRKVAAMS DNANCAAMAS SADRGADGSI GRGGGVDGAG VASSSPGAGG 540 MERGGSGRRG SRSPIRNGSN HRHHGNGTGS RRSGGQGTGS AGKSYDEDGD GYNDRSGKSP 600 RGSTLGLNFR TGRETVAAG

Sequence ? help Back to Top

Protein Sequence Length: 619 aa Download sequence

MRRKRRTATR KKRRSRRKRG RRRSAAMDEE EKVEDEEEEE EEEEGEQKEV DGEEEEEEEE  60
VEGKEEDEEE DEEEDGEEEE EEKEEEEERD ERDMEEGGGG YALVRGLEHV LGRGRWRAIS  120
AMSNSHNVLV AFHALEAASF ARSLARVAKC ENDMVAYSIL TPLSEFLSAL RECFADVTRG  180
LRASDNLQTV HTRQWKSVRA LKATIDELVT VPGHGVIEPL QLFYRAVLEK LHGHFFDKKQ  240
QPNMTYDTLS REVFAFEAQS MPVTTFWHKD LAKGKKWKGH TITSRVTAKD NLILTLDEGG  300
LEEVPYSEIE WGLDEEDSGT GQGRTYAAIA AGGRPQGRGR GEGQRGQTSG DKGQSGPGVG  360
GRGNRQAGGR GQGVKSRHGK SQVMVIVDRF SNEAFVRIVL RIECGLKAEC EELGARVETL  420
TNENMTLRTE LTRLYEECKK LAADNASLKD ELRYLRDDRS RSENGKGELQ QQQQQQATRG  480
NASGEMWKKT LLLRKVAAMS DNANCAAMAS SADRGADGSI GRGGGVDGAG VASSSPGAGG  540
MERGGSGRRG SRSPIRNGSN HRHHGNGTGS RRSGGQGTGS AGKSYDEDGD GYNDRSGKSP  600
RGSTLGLNFR TGRETVAAG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	2	19	RRKRRTATRKKRRSRRKR
2	3	20	RRKRRTATRKKRRSRRKR
3	4	13	KRRTATRKKR
4	4	21	RRKRRTATRKKRRSRRKR
5	10	16	RKKRRSR
6	10	23	RKKRRSRRKRGRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36730.2	6e-12	bZIP family protein