PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG78473.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family C2H2
Protein Properties Length: 767aa    MW: 80429.6 Da    PI: 5.3154
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG78473.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.54.8e-05565587123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 y+C++C+++F+++  L  H++ H
  GBG78473.1 565 YSCGYCTRRFTSSQALGGHQNAH 587
                 99******************988 PP

Sequence ? help Back to Top
Protein Sequence    Length: 767 aa     Download sequence    
MVGELQRGAY RLQDMLGDNE DEVSLTEDAE GEQDDDCDVL HYYTNIGAMC EILESETETS  60
CAVVVRECDE YERGGEERWV NLMALSYQVE VESAVGGGER EYAADDAAEW EVRDESAVGD  120
GEGEYATDDE GEWEGEWGLL ATVEMVAEAA VTATATTTTL TTTIMEVEQG SAVERQGMGG  180
IGEKGGLVDN NNDNNNNSNF NNGSERRMGE LGQEREQRCP CGKKQQGVCD RNQLEGRKLQ  240
SICQCRSSER LVESGWPSQR IAVGVEIEII CNVRGGPGGG CLGQGLLQPC RGSPEVTVQP  300
GGLSGSGSLL EERKGGLDLN RRSSPAAGSP RGSPGRGGSC PQERPFIDYL GGSGNCDAGR  360
KNDHWRRDSL TGTTSVSVST ERQMATSVKI FGVEVGAHGT QHAVGCFSQG SVEAFPLDRG  420
RQQSHVLGTG GGGGGGGGAG GAGGAAGGGA GSYQRRMDDV DSELSLGSHG RIIQNHTSSC  480
PVGSCIPSLG PAQTRAARST LPGPAHLSPG GEKTADGSHN EESSSSISPN HGVSLSQDTG  540
IQRPGESEWM ATSSASGGAV EPRSYSCGYC TRRFTSSQAL GGHQNAHKRQ RAQLRRQNLQ  600
RQGGCSSSFR DAGPASRAST VGDYGHMNQP PLPCHNSALY GGAMRSSSVI GGVHPVAAAA  660
AAAAAAAAHV NPPRMQYPYY NHHTLGGANA TPGSRLPGPP PNPPQSATAA WTHQYSYSYP  720
SSHSIQQQLD NGTQHRASDG HHPMHAMPAG RGLSGRGDVG NRPHSWN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57520.14e-09C2H2 family protein