PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG77939.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 376aa    MW: 41054.2 Da    PI: 6.8343
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG77939.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix271.2e-08149219670
    trihelix   6 evlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 
                   +aLi+a+r        m++++   kl++ +W +v +++++ g+ r++++C  kw+nl +++kk+ + ++ 
  GBG77939.1 149 DMMALIRAKRdqvvhlqGMGTAFACMKLREWKWLDV-ERLKKVGVDREAERCGRKWDNLMQQFKKVHHFQGL 219
                 5789*****944444444444444456777777777.679*************************9887665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    
MQSPSPLSTS STAACCQGEC RETDCGIEDV GDARDGREVW AEQRRTLHPQ REESITRGVQ  60
RLRVGDHEND GDAPAARADD QEWNDDDGEG GEEDAGHVSP CKQSSMGGRG GKMRDCARNG  120
PRGKKAVGKG SDAEADADAE GRQFSSVDDM MALIRAKRDQ VVHLQGMGTA FACMKLREWK  180
WLDVERLKKV GVDREAERCG RKWDNLMQQF KKVHHFQGLS GKQDFFQFSG KERLSKGFNF  240
NMDRAVYDEI LGSTAKSHTI NPKNVADTGA PGGVCLRSAT SADHESVGDG DAAAGHDDDD  300
YGSTRGSSQT TRSPAGFGKR KSMRQQTFEE LTECMEKHGA LVASTMESNN KRQCSIQIRR  360
GVGSGGRSAK NTLRSV