PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG76240.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 561aa MW: 59080.2 Da PI: 7.7843

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG76240.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	28.8	3.2e-09	321	402	2	79
trihelix 2 WtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79 Wt +e l+L + +re++ + +++ +k+ + e+vs++m+e+g+ rs++ C++kw nl ++ k + + ++ s+++s + GBG76240.1 321 WTMEECLVLAKWQREDDAMMANASarhkcmKKGERQEWVSERMKEEGIMRSAEDCRKKWFNLGQKLKLLVDKVGR--SGHQSYW 402 ************99999998755666779999****************************99999888876..4566556 PP

Sequence ? help Back to Top
Protein Sequence Length: 561 aa Download sequence
MGRSRQSSQQ SVQYQGLHSV PPSTHLSMLS QDVDKFGVPP AFPAAVGQLP SWRNDPPGLR 60 DVRPGHVPFY HARDDHGGVA GRSSSSAAMY SQPTAAYMPV HGGSTIGAGS FTAALCGEYE 120 DPFSGGLPRW MSMDDLSGPQ RCYGVTSNQQ WNGGVYSHGQ NDLSRRGAQS GSGQGTLPQG 180 GTPGHGQSQA TTGANVDSGS GVREGQACSH AAPQQVTVEA GSSESVDRLR AGLPPASRGE 240 GRGRGEGRQG TSDSSGQSGR ARQPARGGRG RGGCTPPSSS CPTEASGSGK DVGGHETNDN 300 PTTVDEGMRK GKPPAKKIVP WTMEECLVLA KWQREDDAMM ANASARHKCM KKGERQEWVS 360 ERMKEEGIMR SAEDCRKKWF NLGQKLKLLV DKVGRSGHQS YWDMTEEGRE AEGLYATFDR 420 RLWQAMEWML QRPSGRCDEA MNSDTMGGAE AEGTGGGSGD QAGLDRGGSD TSGSRSKFRR 480 TSGSRVHVGD DPSSVSSVGA AMAESTRVYM DGLDRAAATI AQANKEGATI VTGSIGKMTT 540 QIGAVASAMG EMQLLVGVMG A

Sequence ? help Back to Top

Protein Sequence Length: 561 aa Download sequence

MGRSRQSSQQ SVQYQGLHSV PPSTHLSMLS QDVDKFGVPP AFPAAVGQLP SWRNDPPGLR  60
DVRPGHVPFY HARDDHGGVA GRSSSSAAMY SQPTAAYMPV HGGSTIGAGS FTAALCGEYE  120
DPFSGGLPRW MSMDDLSGPQ RCYGVTSNQQ WNGGVYSHGQ NDLSRRGAQS GSGQGTLPQG  180
GTPGHGQSQA TTGANVDSGS GVREGQACSH AAPQQVTVEA GSSESVDRLR AGLPPASRGE  240
GRGRGEGRQG TSDSSGQSGR ARQPARGGRG RGGCTPPSSS CPTEASGSGK DVGGHETNDN  300
PTTVDEGMRK GKPPAKKIVP WTMEECLVLA KWQREDDAMM ANASARHKCM KKGERQEWVS  360
ERMKEEGIMR SAEDCRKKWF NLGQKLKLLV DKVGRSGHQS YWDMTEEGRE AEGLYATFDR  420
RLWQAMEWML QRPSGRCDEA MNSDTMGGAE AEGTGGGSGD QAGLDRGGSD TSGSRSKFRR  480
TSGSRVHVGD DPSSVSSVGA AMAESTRVYM DGLDRAAATI AQANKEGATI VTGSIGKMTT  540
QIGAVASAMG EMQLLVGVMG A