PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG76093.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Protein Properties

Length: 1718aa MW: 184773 Da PI: 5.7859

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG76093.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	91.4	6.5e-29	985	1086	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f+k+ tpsdv+k++rlv+pk++ae+ g + +tl++edesg+ W+++++y+++s++yvltkGW++Fvk++ L gD+v F++ ++s+ l GBG76093.1 985 FEKAVTPSDVGKLNRLVIPKQHAERWfpldvGTGARAAQTLSFEDESGKHWRFRYSYWNSSQSYVLTKGWSRFVKEKLLVPGDIVYFHRGQTSD--L 1079 89*******************999*444556779**********************************************655455..5 PP EEEEE-S CS B3 93 vvkvfrk 99 +++++rk GBG76093.1 1080 YIGFRRK 1086 9999997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1718 aa Download sequence
MKYATRGVHY DSNMELEMLK EKVIAYFNVR VNIHRTIAAN GDKATTTVHL LDRLKRTRAV 60 HSESQTEESA YSLKGVDEWM CEDTNIDMSM QQKGGVYGTT EFKKLMKFQA RSAGMVQGGT 120 KDDMKVNGAE ISPLSRIKEI PQASPKDFHD LRTIVADGVE YVLLDQMVDF MKKPSEDKNI 180 IREVLHDVTE QAIDAYDIME YSNKNEEDEL VMGTPLCEGT IMAVLRQLGQ AASEVERQRK 240 RTKVWTMVAR RALLPPQGTT QGTVTSARIE MPLSAVNQSV ITSAPGEVAA EDIITGWSLR 300 EEVRSRRGEQ VFATEDAQDT NNDAVSQEVE DEDGNKSPPT VEVSGSDVSS DKDGEEYDPY 360 WDIKGGGTQV TKEWCHGILR LARVFADLHG LIRVVERDKT PDGGLQCWDG GGGAMSEGQG 420 GHVGPGASRV KQGTESDEEE ELEDGSVEMS MNGEMRYNHS ALRQTQERQM IAGDNQGQPH 480 HQFLENKRGP LGTLMEGEGR SLLLPCEEGT SRGVGREAQA AEYEHLSVLG LGARGGGVGE 540 MDEGTLMEME RRCTEENASS YMDGAASSSQ TVSQERTQRG RKTVWTTVAS PCGRMEDLAA 600 AGFGEVEGRG PEAGGGGGGG GGGEVVGGEL PVGGCKVGGG ESLGSGVAHA PNAERINESF 660 CIDAGVEGYG QNHGCSSDRG EPGVVLAEEL EMQQQSWVAD NRRMCSSSPS PLEYPGMGSQ 720 ASRGWGAHLF DEQSLERMSW LRRFSGKEGE LKGLGYERET SINVIERLSG GSTRHAVLLA 780 EGEGEGEGAG AGERGMFSRS HEDKDRRHLQ VVDMLRGNGR EEEEEEEEEG IAEEEEEMEQ 840 HSGRRARLGT LNMTPVGSIN GGDSCNESAS EGQNFGCRRG LAVGLGDGGF TDREDDTGER 900 DYQRENGGGF IQPHLAMFSS VAAGNGAGMS SGAGPGNLAG TLLTHGNRLV VSHNSNTSSS 960 SCMGGAAPAS IVADARKQVK KEPLFEKAVT PSDVGKLNRL VIPKQHAERW FPLDVGTGAR 1020 AAQTLSFEDE SGKHWRFRYS YWNSSQSYVL TKGWSRFVKE KLLVPGDIVY FHRGQTSDLY 1080 IGFRRKPAQG PPPPSTCMVA ATSALDSGLH QHHHHQQQQH QTRHYVHSHG GAFAPRLVNA 1140 SPPLPPSAAS GIHLPATLPC VVPPTPPSLR TPAALAAAAA AAAAAAAAAA GASTRTLPTP 1200 VPQSWLQLGH QFDIHGGPSV DLPSPPLDVG AFMGALGRSM LHHHQPHATP GLGGNNFAPP 1260 QCRPARAAPN RHATAGPAGP SFQPGFYETG CQQGSEPRMR MQQVGDAVRM RCIEEPPPQV 1320 FDCRGSIILS PTSRRSVGSQ APGPSADANQ TRTKEDEDAQ ACSNNTRLFG VNLEVGASPA 1380 SPVTNQQSNS NNDNKKNNGN DNMSNANSIG GGAFGPSEAI LGRAKDGWSD RDHAGPVAGS 1440 SPGRPGGLTW QPAVRWPPEA SSGGCSALDL RQGQGSREQI ERAKQPQQLH LTARCFMGPS 1500 QLCTAHSPSP PHAPSSMPQH NLESSSSYRD PHLVPTHFEK VFDTPLSSFY SGNIDHQQFQ 1560 PHHPHYHHPR QDRHHHDHQA SSQHDDRRDD DDQDLSLQIR CDVRPPPTVT AGTSREFCAP 1620 ILMDPMGQDR PGFSDRGAGG VGADRGGRGG TDSHLLTAEA RLAIGHPLHD GDDSSILTLR 1680 KRTASDAGLG LGYAEAHFLG STPNADIVLM NQKHQHMC

Sequence ? help Back to Top

Protein Sequence Length: 1718 aa Download sequence

MKYATRGVHY DSNMELEMLK EKVIAYFNVR VNIHRTIAAN GDKATTTVHL LDRLKRTRAV  60
HSESQTEESA YSLKGVDEWM CEDTNIDMSM QQKGGVYGTT EFKKLMKFQA RSAGMVQGGT  120
KDDMKVNGAE ISPLSRIKEI PQASPKDFHD LRTIVADGVE YVLLDQMVDF MKKPSEDKNI  180
IREVLHDVTE QAIDAYDIME YSNKNEEDEL VMGTPLCEGT IMAVLRQLGQ AASEVERQRK  240
RTKVWTMVAR RALLPPQGTT QGTVTSARIE MPLSAVNQSV ITSAPGEVAA EDIITGWSLR  300
EEVRSRRGEQ VFATEDAQDT NNDAVSQEVE DEDGNKSPPT VEVSGSDVSS DKDGEEYDPY  360
WDIKGGGTQV TKEWCHGILR LARVFADLHG LIRVVERDKT PDGGLQCWDG GGGAMSEGQG  420
GHVGPGASRV KQGTESDEEE ELEDGSVEMS MNGEMRYNHS ALRQTQERQM IAGDNQGQPH  480
HQFLENKRGP LGTLMEGEGR SLLLPCEEGT SRGVGREAQA AEYEHLSVLG LGARGGGVGE  540
MDEGTLMEME RRCTEENASS YMDGAASSSQ TVSQERTQRG RKTVWTTVAS PCGRMEDLAA  600
AGFGEVEGRG PEAGGGGGGG GGGEVVGGEL PVGGCKVGGG ESLGSGVAHA PNAERINESF  660
CIDAGVEGYG QNHGCSSDRG EPGVVLAEEL EMQQQSWVAD NRRMCSSSPS PLEYPGMGSQ  720
ASRGWGAHLF DEQSLERMSW LRRFSGKEGE LKGLGYERET SINVIERLSG GSTRHAVLLA  780
EGEGEGEGAG AGERGMFSRS HEDKDRRHLQ VVDMLRGNGR EEEEEEEEEG IAEEEEEMEQ  840
HSGRRARLGT LNMTPVGSIN GGDSCNESAS EGQNFGCRRG LAVGLGDGGF TDREDDTGER  900
DYQRENGGGF IQPHLAMFSS VAAGNGAGMS SGAGPGNLAG TLLTHGNRLV VSHNSNTSSS  960
SCMGGAAPAS IVADARKQVK KEPLFEKAVT PSDVGKLNRL VIPKQHAERW FPLDVGTGAR  1020
AAQTLSFEDE SGKHWRFRYS YWNSSQSYVL TKGWSRFVKE KLLVPGDIVY FHRGQTSDLY  1080
IGFRRKPAQG PPPPSTCMVA ATSALDSGLH QHHHHQQQQH QTRHYVHSHG GAFAPRLVNA  1140
SPPLPPSAAS GIHLPATLPC VVPPTPPSLR TPAALAAAAA AAAAAAAAAA GASTRTLPTP  1200
VPQSWLQLGH QFDIHGGPSV DLPSPPLDVG AFMGALGRSM LHHHQPHATP GLGGNNFAPP  1260
QCRPARAAPN RHATAGPAGP SFQPGFYETG CQQGSEPRMR MQQVGDAVRM RCIEEPPPQV  1320
FDCRGSIILS PTSRRSVGSQ APGPSADANQ TRTKEDEDAQ ACSNNTRLFG VNLEVGASPA  1380
SPVTNQQSNS NNDNKKNNGN DNMSNANSIG GGAFGPSEAI LGRAKDGWSD RDHAGPVAGS  1440
SPGRPGGLTW QPAVRWPPEA SSGGCSALDL RQGQGSREQI ERAKQPQQLH LTARCFMGPS  1500
QLCTAHSPSP PHAPSSMPQH NLESSSSYRD PHLVPTHFEK VFDTPLSSFY SGNIDHQQFQ  1560
PHHPHYHHPR QDRHHHDHQA SSQHDDRRDD DDQDLSLQIR CDVRPPPTVT AGTSREFCAP  1620
ILMDPMGQDR PGFSDRGAGG VGADRGGRGG TDSHLLTAEA RLAIGHPLHD GDDSSILTLR  1680
KRTASDAGLG LGYAEAHFLG STPNADIVLM NQKHQHMC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06250.2	9e-45	B3 family protein