PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG76079.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 511aa    MW: 55075.6 Da    PI: 6.3058
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG76079.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix28.53.9e-09177252574
    trihelix   5 qevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtse 74 
                 +e laL++++re++  + +++      + + + e+++++mr++g +rs++ C++kw  l ++ k +++ +++ +++
  GBG76079.1 177 EECLALVRIQREDDALMADASsvhklkKHGERREWIARRMRDEGWNRSAEDCRKKWFALGQKLKVLADKDGDSSAR 252
                 799*********99999987444444488999****************************9999999998886554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 511 aa     Download sequence    
MLGSPQPRAM SSPFSGFTAR SVPPPGFTAT LLGEDDDLEC GVNRSGAGFG VNGDRRADQE  60
REHDNVAKGR CGDASHEFGR YEQCDGGHVP TIDTSNSSRP AAERSGHATP TQGQRADAGD  120
VPAAAVLQQP SPFAPATGAG GCADGSTVMQ GTDAGGVRGR ASVQAPPAQK KVQRSLEECL  180
ALVRIQREDD ALMADASSVH KLKKHGERRE WIARRMRDEG WNRSAEDCRK KWFALGQKLK  240
VLADKDGDSS ARGSSDRGGS DRERSDGNAS AGKTRRTSSR RVNDGDGTSS MSGMSVTLAE  300
STRVYFDGLD KAAATIAEAQ TAGATMVAGR LGDMATQIGA VATAMTEGNA VLQLLLGVMA  360
MVRERIDGKE VVIQEMRYER GSELERETEW CPDVHTVHTR VYYALVNGLM AMRMTVGLGY  420
NVEDNLAEVV LSVKKLSEVV PNNWVLPNSD VVGDVVRYLM SAIAEEHLAI MRGDVSYVAH  480
MEPRLVGRPY LHGAVQMWCP DDDLRAVRNR W