PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG76029.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 825aa MW: 91948.9 Da PI: 8.4065

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG76029.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	25.4	3.8e-08	741	820	2	73
trihelix 2 WtkqevlaLiearr..emeerlr......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrts 73 W + e l+L++ + mee++r r k+k + W +v + m+erg+ +++ C +kw++l ++++++ e+k ts GBG76029.1 741 WNEAEQLLLVRCKIdyGMEEESRgrssvkRFKSKDTVWCKVTALMAERGVVKEQDACSQKWDSLMSHMRRVRDYERKTTS 820 77777777777766442333333212222457********************************************9754 PP

Sequence ? help Back to Top
Protein Sequence Length: 825 aa Download sequence
MKTKTWKWDG VDKRLVQMGV TSKKAVDCGK KWDNLYQKFK TVHKFMGESR KPNFFTLTPG 60 ERKELGFDFR MDERVYLEMT AMSRGDHTIH PTNLADTGAA GGVQMAGPHG GRNESDGSEG 120 CGDGQDDDQG STRDSTFSGG GGCGGGKRKN VRQQTFNMIA DVMKDHENLM AMTVDSASKR 180 QCSILTRQCD ILERELEVQK EHYVKADQAN FMMCNAAGVV VMEARVSRQL PAVVGQGQAR 240 HPLPLQHAGA SGGGKTPSAQ KGEEVASDSR TTAADHTTTS GLAEGAEEGR VDDVRRDYGR 300 RDGKWEGDDD DDHLLVTRLK GATKEDDLEV RSKLWVDRDA FWGRGPGKPL REVIEDPAQC 360 EPALYRARSV EKLVLCTIHG WIFKSSLRRT GFARAESYIT LDLTTNVARA VWQRFEWSKV 420 LSPALAYHTL AMKMDVPPWF VGVKIVDRLE DDDMAARQEA TVLRRADCWT YVVWCGQWAD 480 SGRMKQERLS RDCLRALFNA CTWIMHMGGD DDRSHYEAWF YASMVAKPTM IAAGSYIFNW 540 RRHIVDTANL VLDRLGKAHL TLGDYPLCIL EWSDCRLVFG HNAALKNAAE AAKHGWIGSR 600 PGPRRTTMEM RAVDSWVRPE GSGGVWIVGG LVCGIRKRRT VRLQLQTLVH GRDGCPLPYK 660 HQQTLLSADQ GIQWTAIASK AKRRGGKHNE ETVVDAGKGK SAADCGADGG DDSTDGDDAG 720 GGTQEGVAAT PQNISQPRAV WNEAEQLLLV RCKIDYGMEE ESRGRSSVKR FKSKDTVWCK 780 VTALMAERGV VKEQDACSQK WDSLMSHMRR VRDYERKTTS RCPRR

Sequence ? help Back to Top

Protein Sequence Length: 825 aa Download sequence

MKTKTWKWDG VDKRLVQMGV TSKKAVDCGK KWDNLYQKFK TVHKFMGESR KPNFFTLTPG  60
ERKELGFDFR MDERVYLEMT AMSRGDHTIH PTNLADTGAA GGVQMAGPHG GRNESDGSEG  120
CGDGQDDDQG STRDSTFSGG GGCGGGKRKN VRQQTFNMIA DVMKDHENLM AMTVDSASKR  180
QCSILTRQCD ILERELEVQK EHYVKADQAN FMMCNAAGVV VMEARVSRQL PAVVGQGQAR  240
HPLPLQHAGA SGGGKTPSAQ KGEEVASDSR TTAADHTTTS GLAEGAEEGR VDDVRRDYGR  300
RDGKWEGDDD DDHLLVTRLK GATKEDDLEV RSKLWVDRDA FWGRGPGKPL REVIEDPAQC  360
EPALYRARSV EKLVLCTIHG WIFKSSLRRT GFARAESYIT LDLTTNVARA VWQRFEWSKV  420
LSPALAYHTL AMKMDVPPWF VGVKIVDRLE DDDMAARQEA TVLRRADCWT YVVWCGQWAD  480
SGRMKQERLS RDCLRALFNA CTWIMHMGGD DDRSHYEAWF YASMVAKPTM IAAGSYIFNW  540
RRHIVDTANL VLDRLGKAHL TLGDYPLCIL EWSDCRLVFG HNAALKNAAE AAKHGWIGSR  600
PGPRRTTMEM RAVDSWVRPE GSGGVWIVGG LVCGIRKRRT VRLQLQTLVH GRDGCPLPYK  660
HQQTLLSADQ GIQWTAIASK AKRRGGKHNE ETVVDAGKGK SAADCGADGG DDSTDGDDAG  720
GGTQEGVAAT PQNISQPRAV WNEAEQLLLV RCKIDYGMEE ESRGRSSVKR FKSKDTVWCK  780
VTALMAERGV VKEQDACSQK WDSLMSHMRR VRDYERKTTS RCPRR