PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG75870.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family M-type_MADS
Protein Properties Length: 412aa    MW: 42450.4 Da    PI: 4.7069
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG75870.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF771.4e-24959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                +ri++++nrqvtf+kR+ng++KKA ELSvLCd ++ ++if s++kl+ y+s
  GBG75870.1  9 ERISDERNRQVTFTKRKNGLMKKAMELSVLCDCDIGLVIFNSNNKLFQYAS 59
                69***********************************************86 PP

Sequence ? help Back to Top
Protein Sequence    Length: 412 aa     Download sequence    
MGRRKIRIER ISDERNRQVT FTKRKNGLMK KAMELSVLCD CDIGLVIFNS NNKLFQYAST  60
DMDCILGKFK DLRSEPHEVK NNQDLFIQHF ASQSNGIGAG GHSRGHHMRG EVVGGGPGGG  120
GDGSAARKKR QLSKQLSANG GCHADDDDDD DDMDFDADGE GEGHVEGVGP EEEEEEEEEE  180
DDEEEDCVVP RENSLIKFDR LGSPAVSDCS MSSFSEGGFL FNSFDQGGGG MVTNEAPVGG  240
VVAGIVPGSG GSGGSGGGGG GGGGAGGGGG GELTLRTSLG PSIMSSSHVP LTPRAEKAYS  300
RLGREFDFMT QHLGFAQENN SLTLETKPLP TTLALGHTTT QTDLSGAAGG VPGGTGTMVT  360
GGTMGPGGTG SGGGGGGGGG KNPSSPVQES RHHFCTSPQK RPDSGIEVAP RC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37940.14e-21MIKC_MADS family protein