PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG75622.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

HB-other

Protein Properties

Length: 1178aa MW: 119826 Da PI: 5.8887

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG75622.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	50.9	2.7e-16	30	84	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +R ++t+ q +Le++F++ p +e r eL++k+++t +q+++WFqNrR++ kk GBG75622.1 30 NRLRLTDAQKAILEAAFAMGAFPPRELRIELSQKTNMTMEQISTWFQNRRMRLKK 84 68999***********************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1178 aa Download sequence
MRGGASGQGS SKHGEDGGAG GSQGKNPKFN RLRLTDAQKA ILEAAFAMGA FPPRELRIEL 60 SQKTNMTMEQ ISTWFQNRRM RLKKPDPSAA QHGGASQTMR STTVVGGIVP LTTRNHTSGP 120 SPPSGVNSNH QALTNTNSSI KQGLMVPNLN QGANNHTSPH HNENHHGGTV VAFPSSGAGA 180 GTFRHTQAIS DMAMRSGEEC KDGRSGGEVV GSPALCSTPN SNPTSTGSGL GAGGVSGNNS 240 GGVRGGGGGG NVGGVGAGGI HSLSSERLNP LLRVHKTAIG QPATSPVPLW IPTLAQAQAA 300 AAAAATAAAA EEAEILTSAT AAAVSAAAQA GSNVLRHVPS ADNTSTAPEG CLASTLVPPA 360 PPPPPAGDSN NVGTRQPPRL PLFSASSLSM SAVVGPIGTP SLSMITSTIT TTTLPASSSS 420 SCSASYSISL ATSSATAAMV APLTRTTPVV GGSSERQNVS GPASPSLPRA ALVDPSAAAL 480 PPAGPQSSLP PTTIASSAKE RTSPRHRLLL GSGSGSSLVL SPRLAESAAT PVESAATPVE 540 QQRAPDVTPS ELNGPMETPD LVPRDESHVG SLGTTGYDKA EGPSPAAGES REQEAVYFSC 600 SAATPAPAAA ESKKSIAEGA VGPGSVGSSS PVRMGRPPRI SLGLSSVSAA IAPLPPVYSD 660 SACSLPPEVP SLLVHVSTNV HRTLLSRGSA LAAQPAATSK DIAAAHAGAC APSSPSVHTS 720 VPAASTSPQA VQIPAASPRS SPTTTVQPLL PSSFATPPIS SLAHLDETRH ADAASPPPAV 780 ETLSAVGKSP PCVVSKSAVQ RDGPPPLLVV SPTAPPPPPP PVLATRGLIS SLSSDVPAPI 840 SPAQENDRKS PQTIVRSPLG HQAMIPVPVS VEGDGARDRQ GREKEMDMAV EVTVPHEELP 900 AAATAGRKAG EEYGCGERAR GEVSPSHQAA SSPSVKPASS PRPNHPVPSA GSPILDRKQE 960 EDGNEEVLPV FRGGNNEAVN VKDRSDGDAF VGVSGSGEHV VKGGRAPAGG EGGGGEAKRV 1020 EGDTKGGGYF DLTMTDGGAT QQEVKEVAAL ASLMQREVGK AEQEWGGIRQ WCGEGGQQGR 1080 EEKEEGELDD DEEEEEEERR RLMHDSLRSP EGESNTLLAS KDEELGGEGT EGEEQLQLEL 1140 GKPELSSDGD QEGHRRRLDR DQGEHRQRIE FSLRANSE

Sequence ? help Back to Top

Protein Sequence Length: 1178 aa Download sequence

MRGGASGQGS SKHGEDGGAG GSQGKNPKFN RLRLTDAQKA ILEAAFAMGA FPPRELRIEL  60
SQKTNMTMEQ ISTWFQNRRM RLKKPDPSAA QHGGASQTMR STTVVGGIVP LTTRNHTSGP  120
SPPSGVNSNH QALTNTNSSI KQGLMVPNLN QGANNHTSPH HNENHHGGTV VAFPSSGAGA  180
GTFRHTQAIS DMAMRSGEEC KDGRSGGEVV GSPALCSTPN SNPTSTGSGL GAGGVSGNNS  240
GGVRGGGGGG NVGGVGAGGI HSLSSERLNP LLRVHKTAIG QPATSPVPLW IPTLAQAQAA  300
AAAAATAAAA EEAEILTSAT AAAVSAAAQA GSNVLRHVPS ADNTSTAPEG CLASTLVPPA  360
PPPPPAGDSN NVGTRQPPRL PLFSASSLSM SAVVGPIGTP SLSMITSTIT TTTLPASSSS  420
SCSASYSISL ATSSATAAMV APLTRTTPVV GGSSERQNVS GPASPSLPRA ALVDPSAAAL  480
PPAGPQSSLP PTTIASSAKE RTSPRHRLLL GSGSGSSLVL SPRLAESAAT PVESAATPVE  540
QQRAPDVTPS ELNGPMETPD LVPRDESHVG SLGTTGYDKA EGPSPAAGES REQEAVYFSC  600
SAATPAPAAA ESKKSIAEGA VGPGSVGSSS PVRMGRPPRI SLGLSSVSAA IAPLPPVYSD  660
SACSLPPEVP SLLVHVSTNV HRTLLSRGSA LAAQPAATSK DIAAAHAGAC APSSPSVHTS  720
VPAASTSPQA VQIPAASPRS SPTTTVQPLL PSSFATPPIS SLAHLDETRH ADAASPPPAV  780
ETLSAVGKSP PCVVSKSAVQ RDGPPPLLVV SPTAPPPPPP PVLATRGLIS SLSSDVPAPI  840
SPAQENDRKS PQTIVRSPLG HQAMIPVPVS VEGDGARDRQ GREKEMDMAV EVTVPHEELP  900
AAATAGRKAG EEYGCGERAR GEVSPSHQAA SSPSVKPASS PRPNHPVPSA GSPILDRKQE  960
EDGNEEVLPV FRGGNNEAVN VKDRSDGDAF VGVSGSGEHV VKGGRAPAGG EGGGGEAKRV  1020
EGDTKGGGYF DLTMTDGGAT QQEVKEVAAL ASLMQREVGK AEQEWGGIRQ WCGEGGQQGR  1080
EEKEEGELDD DEEEEEEERR RLMHDSLRSP EGESNTLLAS KDEELGGEGT EGEEQLQLEL  1140
GKPELSSDGD QEGHRRRLDR DQGEHRQRIE FSLRANSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47370.1	2e-07	HD-ZIP family protein