PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG74957.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

bHLH

Protein Properties

Length: 1316aa MW: 134823 Da PI: 5.1067

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG74957.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.7	2.4e-09	882	923	9	55
HHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 r RR+ri +++ L++l+P+ + K + a++Le+A+eY+k Lq GBG74957.1 882 ARLRRERISERIRALQRLVPNgN------KADTASMLEEAIEYVKFLQ 923 599****************55......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 1316 aa Download sequence
MGVHDDSPSP MDDDDGQEQH DHRHNSRDRI GRAHSHIGGS ATAAAAIIGV DQTAAAGLSR 60 RAASPLAETS TSTSRSMHCS EFPPRSPRVG TPPPSSASAC VVRSHLAKNM LPRQQPRTAP 120 ISSMTRATAS SMAADAANAV VENTSRGVEE KEGGLSLPPQ ASSTDCIAMD SSCGDHDSEA 180 KFSSITAADL SADLQESMLP ATARTLGMVV HSHSHSHEVT TLCSASLSDT SGHLLSQSRA 240 DAGPLMPQTS VVHSHSHPVV CGNDSGSVQM MVPSLRHEVS NPGSTFMDSL PCVPLEKDVQ 300 WDLGPIGPIS GVPNDVIWDF FIHGLVDSNP LAGLPSHVEP DDVMPEATAA ASSLMSTPPS 360 FEVSNPCGLT KQNLPPCPEL GVNFPTSRAV KVDRRPSAQL VTRDFTPPHT VTVRAECEGS 420 ILVDPIGSIF VRPAAPASSS ENPTAKSLDE QVAENTSLLG YQSRPYVPEG RRALSTADGQ 480 RILPRTLATE ATGKRGGVGG TTGGDHCQNS NMDVRNYSDA STTPFVTSVC DLGPSSQCMG 540 GSPGPVMMEG GATTRAATGA PSDSAAVSSS MQLHVDHIDP CHLAMPHSSE LSQCCSISSM 600 PSSKSTATAA VLPMLVSMDA HTSLGSSGGT CCMDNMPTEI VTRVCSDGSI LLPVGGRMIA 660 SDNPQAGPPL PPPPSTGSVM QEGEDRPNSN DPPLTVVAVP PPPLPPAAIN TVQEDLVGFQ 720 TIMDELITVT TSSPYHPNQS HVMHHNHAQC ITSSQNTLAM MTVRQMSSVA AELAGLAPAT 780 AASIAMLDSL KKRSRDEFER GNGGAHPPLT VLSRLDPSSQ QQSVSVSELM DYSMANYGGG 840 GGFPCRVPSN GGDVAGISVT ELPSAKTRFK RPPATDPQSV AARLRRERIS ERIRALQRLV 900 PNGNKADTAS MLEEAIEYVK FLQLQVQMLS VTVGSENDNS DLNVADGPPD TRDNAELRRP 960 QKVAEVLPAP LQPESCCCCL CCSSCVVLVL VLVFVLVLAA AVAAAAAVAA TVLAVVGVVA 1020 VVAAVXVXVA VVAAVTVTVA VVAAVTVTVA VVAAVTVVAA VAAVPAVAAV AVVAAVAAVT 1080 VTVAAAVAAV TAAAVTAAVT VAAVTADVVA AVTVTVAVAI VAAAVTVTVA VVAPVAAVTV 1140 AVVVVAAAAA AVTVAVTAAA VTAVVTVAVV TADVVAAVTV TVDVAIVAAA VTVTVVVVAP 1200 VPAVIVAVVV VAAAAAAAAV AVVVAVTVAV AVTIAQQQQE QQQQNQMVNL EQKTDDQVQQ 1260 MNQRGNLQPG QKQSQEEPMV VSRQWPTSGP PPALDQLLDH TVAAEACRSH PQERIV

Sequence ? help Back to Top

Protein Sequence Length: 1316 aa Download sequence

MGVHDDSPSP MDDDDGQEQH DHRHNSRDRI GRAHSHIGGS ATAAAAIIGV DQTAAAGLSR  60
RAASPLAETS TSTSRSMHCS EFPPRSPRVG TPPPSSASAC VVRSHLAKNM LPRQQPRTAP  120
ISSMTRATAS SMAADAANAV VENTSRGVEE KEGGLSLPPQ ASSTDCIAMD SSCGDHDSEA  180
KFSSITAADL SADLQESMLP ATARTLGMVV HSHSHSHEVT TLCSASLSDT SGHLLSQSRA  240
DAGPLMPQTS VVHSHSHPVV CGNDSGSVQM MVPSLRHEVS NPGSTFMDSL PCVPLEKDVQ  300
WDLGPIGPIS GVPNDVIWDF FIHGLVDSNP LAGLPSHVEP DDVMPEATAA ASSLMSTPPS  360
FEVSNPCGLT KQNLPPCPEL GVNFPTSRAV KVDRRPSAQL VTRDFTPPHT VTVRAECEGS  420
ILVDPIGSIF VRPAAPASSS ENPTAKSLDE QVAENTSLLG YQSRPYVPEG RRALSTADGQ  480
RILPRTLATE ATGKRGGVGG TTGGDHCQNS NMDVRNYSDA STTPFVTSVC DLGPSSQCMG  540
GSPGPVMMEG GATTRAATGA PSDSAAVSSS MQLHVDHIDP CHLAMPHSSE LSQCCSISSM  600
PSSKSTATAA VLPMLVSMDA HTSLGSSGGT CCMDNMPTEI VTRVCSDGSI LLPVGGRMIA  660
SDNPQAGPPL PPPPSTGSVM QEGEDRPNSN DPPLTVVAVP PPPLPPAAIN TVQEDLVGFQ  720
TIMDELITVT TSSPYHPNQS HVMHHNHAQC ITSSQNTLAM MTVRQMSSVA AELAGLAPAT  780
AASIAMLDSL KKRSRDEFER GNGGAHPPLT VLSRLDPSSQ QQSVSVSELM DYSMANYGGG  840
GGFPCRVPSN GGDVAGISVT ELPSAKTRFK RPPATDPQSV AARLRRERIS ERIRALQRLV  900
PNGNKADTAS MLEEAIEYVK FLQLQVQMLS VTVGSENDNS DLNVADGPPD TRDNAELRRP  960
QKVAEVLPAP LQPESCCCCL CCSSCVVLVL VLVFVLVLAA AVAAAAAVAA TVLAVVGVVA  1020
VVAAVXVXVA VVAAVTVTVA VVAAVTVTVA VVAAVTVVAA VAAVPAVAAV AVVAAVAAVT  1080
VTVAAAVAAV TAAAVTAAVT VAAVTADVVA AVTVTVAVAI VAAAVTVTVA VVAPVAAVTV  1140
AVVVVAAAAA AVTVAVTAAA VTAVVTVAVV TADVVAAVTV TVDVAIVAAA VTVTVVVVAP  1200
VPAVIVAVVV VAAAAAAAAV AVVVAVTVAV AVTIAQQQQE QQQQNQMVNL EQKTDDQVQQ  1260
MNQRGNLQPG QKQSQEEPMV VSRQWPTSGP PPALDQLLDH TVAAEACRSH PQERIV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	883	888	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27740.1	3e-14	bHLH family protein