PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG72763.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 637aa MW: 69377.8 Da PI: 6.6037

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG72763.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	33.9	8.4e-11	298	374	2	71
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71 W+ +e l+L++ +re e +l r + k +W++++k+m++ g + + C +kw+nl + ykki+++++ r GBG72763.1 298 WSPEEQLQLVRCKREQEMHLAglghnygRMRTKDWKWDDIAKRMASAGKPKDADDCMKKWDNLFQNYKKIQRTRIAR 374 9***********66666653333333778*************************************9998876 PP

Sequence ? help Back to Top
Protein Sequence Length: 637 aa Download sequence
MRGCWCGSGR NTSCDGGAST AVRPIHVRPF AVVGDASAPV GKEPETEELP TLPLANGSTQ 60 LWWQAVRAGG SGCTEGDEYT SLLQQGLGDD DDGGLDLRFG LCSGGSKEVS RTLIIDTDPS 120 PRGVGQGGSQ RMDQTTLHAR ASVAASAGPS IVLRCQGSTT PSADRSTSNW PARNGAAAGS 180 PRVECARPSM PECTTPTQFD VRDACACRPP LRPVPTVENI TRGVSNMRAH SDGGDDADER 240 LTEDVYAGDD DEDIPVRPLG KTGGRGRARS RGVVRGRSVG RGGRGCVNDD AGKSVTYWSP 300 EEQLQLVRCK REQEMHLAGL GHNYGRMRTK DWKWDDIAKR MASAGKPKDA DDCMKKWDNL 360 FQNYKKIQRT RIARIADPSQ LQQATSRASA VENIALRVLH GWVFKSGNRP RGYNLAFQYA 420 LESVATDIAR AMWYGEEWCN VVSPAVCAHT IVLSMDLPLW FAGVKVENRP DDDDMAAYQE 480 SIIICVTHAF RAAVQMGAVI DGEFISHDRL CRVADCLRLL LAACMWIMRM SGDDPRSHFE 540 AFHFATLVSK PTLVASMHRS FDHRRSIRLA VKAVTERLGK ANVAFGEHPD YLPHWADRGI 600 VFGHGARIDG PEEAKKLDWL GSGPADDDND DDDKGDA

Sequence ? help Back to Top

Protein Sequence Length: 637 aa Download sequence

MRGCWCGSGR NTSCDGGAST AVRPIHVRPF AVVGDASAPV GKEPETEELP TLPLANGSTQ  60
LWWQAVRAGG SGCTEGDEYT SLLQQGLGDD DDGGLDLRFG LCSGGSKEVS RTLIIDTDPS  120
PRGVGQGGSQ RMDQTTLHAR ASVAASAGPS IVLRCQGSTT PSADRSTSNW PARNGAAAGS  180
PRVECARPSM PECTTPTQFD VRDACACRPP LRPVPTVENI TRGVSNMRAH SDGGDDADER  240
LTEDVYAGDD DEDIPVRPLG KTGGRGRARS RGVVRGRSVG RGGRGCVNDD AGKSVTYWSP  300
EEQLQLVRCK REQEMHLAGL GHNYGRMRTK DWKWDDIAKR MASAGKPKDA DDCMKKWDNL  360
FQNYKKIQRT RIARIADPSQ LQQATSRASA VENIALRVLH GWVFKSGNRP RGYNLAFQYA  420
LESVATDIAR AMWYGEEWCN VVSPAVCAHT IVLSMDLPLW FAGVKVENRP DDDDMAAYQE  480
SIIICVTHAF RAAVQMGAVI DGEFISHDRL CRVADCLRLL LAACMWIMRM SGDDPRSHFE  540
AFHFATLVSK PTLVASMHRS FDHRRSIRLA VKAVTERLGK ANVAFGEHPD YLPHWADRGI  600
VFGHGARIDG PEEAKKLDWL GSGPADDDND DDDKGDA