PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG72313.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family C3H
Protein Properties Length: 410aa    MW: 46448.8 Da    PI: 10.2281
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG72313.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH21.93.1e-07832127
                --S---SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHgp 27
                +kt++Cr f++ G C +  +C+FaHg+
  GBG72313.1  8 FKTRICRAFQQ-GNCDR-TNCSFAHGE 32
                69*********.*****.*******96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    
MAHYGDLFKT RICRAFQQGN CDRTNCSFAH GEEELRIVGN NERRYMGEGQ GQVWDRLRRP  60
ASPPRNVYRR RPSPHARGPA SPHARGAASP HARGPASPGR PPPMRRGPPM DNRNRNRSHS  120
PMYKRRRSNS NSPSRSPRPL NGDIRQIKRV RPDHGEQDYS DVSGEGGDDI PHRVASRLSP  180
MSGGGGKDVY ELQEQMSKMS AEKQELLQEV RALTAKMHAM EDALKRKEVM VKDLLTKLTV  240
SEEKFQRLEL QLREIVTAQI KVEKSKEHYE CSQAELRKRL EEAMGENQAD PVMKVLGDED  300
LTRRHPASTP KLAPGHGEGS GRAMGGRATS PGVRSKEGLR MQESVGHERE REQDREMERG  360
DRDRDRDGER EKYRHRDREN GLRREKCGSA GGGSHGGRKH HGEDGESEYF