PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG72060.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 1233aa MW: 134495 Da PI: 10.4969

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG72060.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	32	3.1e-10	507	581	2	69
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 Wt +e ++L++ +re e +l r + k+ +W++++k+m+ g ++++ C +kw+n+ + ykk+++ ++ GBG72060.1 507 WTPEEQMQLVRCKREQEMHLAglghnygRMRTKEWKWDDIAKRMANAGRPKEAEDCMKKWDNIFQIYKKVQRFQN 581 ************66666653333333778************************************987655 PP

Sequence ? help Back to Top
Protein Sequence Length: 1233 aa Download sequence
MANNGALMES VQFSNLSLLL LPHATDTSLS TAIPSDRGSG AGSGGQDAMS GGSSSSSSSP 60 DPSQQPSNSM MMHMTFYWGR QVSILFDAWR TDKTSEYGLA LLAIFIACLL HQFLTVYRAK 120 LEASSSMEST AAASRKARSS GLVLGLARKK LSRMSRERSP FDVEFMADMQ RRLPLLLLVV 180 VVFVFVVFLY VCLSCRPWKQ RPKRRVSAKG GVLQEGRPMA GIQARAVLPA AEGGRKSATT 240 EPSRRYDPSM YSHLPLWETP LPPLDEEPEG DELPTFPLGS VSTQLLLQTV LAGGSASNGR 300 GEYTTLLQQG LGDDDTTTGE LISVSGYVLA TSAYKAVHIC GGASVTGGVG PSAAGRHHGS 360 SAPSADRLTT TCPARDGVAV GSLRSGGTLH SMPKTITPAQ LDLRDDDTCS PAVRPTPSVE 420 NITRGVSNMR AHSDGGDDDG GAGDDADERF GDDVEAGDDD DDIPIRPLGK TGGRGRGRSR 480 GAVRDRSVGR GGRGGVSDDS GESVTYWTPE EQMQLVRCKR EQEMHLAGLG HNYGRMRTKE 540 WKWDDIAKRM ANAGRPKEAE DCMKKWDNIF QIYKKVQRFQ NASGRPDFFR LSNEERKEHN 600 FKFRMERALV FSRLREDRND TALWAGRSHV PPSTMSFPVI QKRRRGRSIC ERLLKSCASQ 660 PVRMSSSPRR CMQYRSPPHL LQTAHNNDEV VQACSPRIAV IVDLPFFSPP VFSPRSTLAV 720 VFGVTSSSSR RVVLSSSSSS IFYSSRRGGP IFCLPRLRRR LLPMNRSLAL GGGPSSSFFF 780 RWREIFCLPR ARRRRHATAA RETCFPLIRS HRTGRPQNLP RNISTRGNTR GKKRDVVVDD 840 SQGQGRGRRQ APKAKRLRTE DASATVPRRG AQGWAAAAEG DYDDEFTTEE EQAEATTSDV 900 HDSSWQRSSD HTASKRMLTP PLQAQQLRGC ETRIEKAPVV DLGGDDDEPL ERRRIRIRTT 960 ATPPEVAVRV AANERPVSIG AEEGGAAGAG GSGTVGAVAT TREEATVGAT AKEEARGDKK 1020 GDREAGEPGS SRVRRSVMTK DLIDRAVLWV DDKALWTTGE GRRPYNIVHD TREYFVAIAS 1080 GLPPPAVLRS VVLPKSSTRV GKIVDQSAAS DLPCGGSGER GSAHLARLGI QVREPPKGIP 1140 CCFPVLARIL CDGRRACYVV RRGVVRRCQF GGLRAHDRSV DGPATVVRRR QPRGQTGRRR 1200 HGGAPGVHRD LRRACIPRGG ANGGAFRWRV HLA

Sequence ? help Back to Top

Protein Sequence Length: 1233 aa Download sequence

MANNGALMES VQFSNLSLLL LPHATDTSLS TAIPSDRGSG AGSGGQDAMS GGSSSSSSSP  60
DPSQQPSNSM MMHMTFYWGR QVSILFDAWR TDKTSEYGLA LLAIFIACLL HQFLTVYRAK  120
LEASSSMEST AAASRKARSS GLVLGLARKK LSRMSRERSP FDVEFMADMQ RRLPLLLLVV  180
VVFVFVVFLY VCLSCRPWKQ RPKRRVSAKG GVLQEGRPMA GIQARAVLPA AEGGRKSATT  240
EPSRRYDPSM YSHLPLWETP LPPLDEEPEG DELPTFPLGS VSTQLLLQTV LAGGSASNGR  300
GEYTTLLQQG LGDDDTTTGE LISVSGYVLA TSAYKAVHIC GGASVTGGVG PSAAGRHHGS  360
SAPSADRLTT TCPARDGVAV GSLRSGGTLH SMPKTITPAQ LDLRDDDTCS PAVRPTPSVE  420
NITRGVSNMR AHSDGGDDDG GAGDDADERF GDDVEAGDDD DDIPIRPLGK TGGRGRGRSR  480
GAVRDRSVGR GGRGGVSDDS GESVTYWTPE EQMQLVRCKR EQEMHLAGLG HNYGRMRTKE  540
WKWDDIAKRM ANAGRPKEAE DCMKKWDNIF QIYKKVQRFQ NASGRPDFFR LSNEERKEHN  600
FKFRMERALV FSRLREDRND TALWAGRSHV PPSTMSFPVI QKRRRGRSIC ERLLKSCASQ  660
PVRMSSSPRR CMQYRSPPHL LQTAHNNDEV VQACSPRIAV IVDLPFFSPP VFSPRSTLAV  720
VFGVTSSSSR RVVLSSSSSS IFYSSRRGGP IFCLPRLRRR LLPMNRSLAL GGGPSSSFFF  780
RWREIFCLPR ARRRRHATAA RETCFPLIRS HRTGRPQNLP RNISTRGNTR GKKRDVVVDD  840
SQGQGRGRRQ APKAKRLRTE DASATVPRRG AQGWAAAAEG DYDDEFTTEE EQAEATTSDV  900
HDSSWQRSSD HTASKRMLTP PLQAQQLRGC ETRIEKAPVV DLGGDDDEPL ERRRIRIRTT  960
ATPPEVAVRV AANERPVSIG AEEGGAAGAG GSGTVGAVAT TREEATVGAT AKEEARGDKK  1020
GDREAGEPGS SRVRRSVMTK DLIDRAVLWV DDKALWTTGE GRRPYNIVHD TREYFVAIAS  1080
GLPPPAVLRS VVLPKSSTRV GKIVDQSAAS DLPCGGSGER GSAHLARLGI QVREPPKGIP  1140
CCFPVLARIL CDGRRACYVV RRGVVRRCQF GGLRAHDRSV DGPATVVRRR QPRGQTGRRR  1200
HGGAPGVHRD LRRACIPRGG ANGGAFRWRV HLA