PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG70550.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 491aa    MW: 52948.2 Da    PI: 9.7585
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG70550.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix31.83.7e-10239312269
    trihelix   2 WtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 
                 W+ +e l+L ++  e++    +++       + ++We+v+ ++ e g++rs++ C++kw ++ k+ ++i++  +
  GBG70550.1 239 WSLEERLELAKFAGEDDALTADAEgsqacmTRSKRWEWVAGRLGEIGYSRSAEDCRKKWAEMVKKVREIRDACE 312
                 777777777777777666666554445556899********************************999998655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 491 aa     Download sequence    
MHVVHHLRCR AVPWALVSRH LHGLAGGRYV ADAQPLWGRG QCVGVPLHNS ISSIRRTLSL  60
HAPSPGAVEV RSVVRAVRPN ITSVVGRKFV PEGNNISHAI QRCGGIGRIV EGGLTDRDVA  120
VAARVYARPY VAHPPRLTAA QDGVLGGGRA CPCRCLRDST GTTVIIIDVD NRERGLVGSH  180
MFLWGLFVIV SVFVVFAVVV LLCLGAVVVA FLATRRASAG GQKRKGGSSP RPWKKNSPWS  240
LEERLELAKF AGEDDALTAD AEGSQACMTR SKRWEWVAGR LGEIGYSRSA EDCRKKWAEM  300
VKKVREIRDA CEGSGKQVYW DTTTEQWRKL GLSLTFERQL WDTMEWYRLK KSVTCDNTLA  360
SEDLRGGGSP SGGEAGSEGA ETNASDTTTK TRRTSSGKAR RGDSPASMYS MTSVMEESTR  420
ALCEGLERAA NTLARVSTDG SRMVATEIEA VVGAMRQGNA VLEMLVGVMA ERGAGSGRGV  480
GGSRDTDPST T