PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG70347.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 611aa MW: 66661.5 Da PI: 8.7589

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG70347.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	32.8	1.8e-10	353	429	2	70
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekk 70 W ++ aLi+a+r+ + +l r k k +We+v k++ + g+ +r+++ C +kw+nl +++k + + +++ GBG70347.1 353 WILEHMIALIRAKRDQDAHLAglghnygRMKTKTWKWEDVEKRLVQMGVtSRKAVDCGKKWDNLYQQFKSVHKFMGE 429 99999*******66666553333333789*********99999899***************99876665 PP

Sequence ? help Back to Top
Protein Sequence Length: 611 aa Download sequence
MADLYRRLPL LLLVALLLLI VVVFHICFLG RVPGRKQTRQ TPKRSRKMDK LQTKTAMSVE 60 GGGSSRQRCN SAEGGRRPYD PTLYNHLPSH EIPLPPSDDD VDEPRSSTVP LGSGSTQDWM 120 GSQVYRHEST PTYTDLLEGR TSAGNDAGLV DLSFGLRSGS GEGMTHTVVV NPASATKHKS 180 PSVRAAGPAD SRGFVSPRRV ALSTASVAAS RRKTGGLAGC RTTSAGSTID REGDDDERVA 240 TEVIGHQFWD DERQRLRSAH TSSITRGVAR MSVGGDNVFV DCDAGGGEEI AVDEGRDDND 300 EDDDGEMEIR PVGRKRRGST ATTKVRESRT GRKGKKCAEE SSAGDGTKSR DFWILEHMIA 360 LIRAKRDQDA HLAGLGHNYG RMKTKTWKWE DVEKRLVQMG VTSRKAVDCG KKWDNLYQQF 420 KSVHKFMGES GKPNFFTLTP GERRERGFDF RMDERVYSEM KAMSGGDHTI RPTNLADTGA 480 PGGVQMHGSP GGRNESGSSD VGGGGPDDDR GSTRDSSFSG GGGGGGEASK RKNVRQQTFE 540 AMAAVMKEHG ALMSTTVVTA SKRSCSILMR QCDILEREIQ VQKEHYEKAD QANFMMCNAL 600 MEIAKAIHER A

Sequence ? help Back to Top

Protein Sequence Length: 611 aa Download sequence

MADLYRRLPL LLLVALLLLI VVVFHICFLG RVPGRKQTRQ TPKRSRKMDK LQTKTAMSVE  60
GGGSSRQRCN SAEGGRRPYD PTLYNHLPSH EIPLPPSDDD VDEPRSSTVP LGSGSTQDWM  120
GSQVYRHEST PTYTDLLEGR TSAGNDAGLV DLSFGLRSGS GEGMTHTVVV NPASATKHKS  180
PSVRAAGPAD SRGFVSPRRV ALSTASVAAS RRKTGGLAGC RTTSAGSTID REGDDDERVA  240
TEVIGHQFWD DERQRLRSAH TSSITRGVAR MSVGGDNVFV DCDAGGGEEI AVDEGRDDND  300
EDDDGEMEIR PVGRKRRGST ATTKVRESRT GRKGKKCAEE SSAGDGTKSR DFWILEHMIA  360
LIRAKRDQDA HLAGLGHNYG RMKTKTWKWE DVEKRLVQMG VTSRKAVDCG KKWDNLYQQF  420
KSVHKFMGES GKPNFFTLTP GERRERGFDF RMDERVYSEM KAMSGGDHTI RPTNLADTGA  480
PGGVQMHGSP GGRNESGSSD VGGGGPDDDR GSTRDSSFSG GGGGGGEASK RKNVRQQTFE  540
AMAAVMKEHG ALMSTTVVTA SKRSCSILMR QCDILEREIQ VQKEHYEKAD QANFMMCNAL  600
MEIAKAIHER A