PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG69847.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family LBD
Protein Properties Length: 330aa    MW: 34835.4 Da    PI: 7.0425
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG69847.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26040.95.9e-132554497
      DUF260 44 kllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelall 97
                 +++a+pe++r ++++sl+yeA+ r  +PvyG++g+++++++ l+q++++ +l+
  GBG69847.1  2 GFITAVPESQRAALFQSLLYEACGRSINPVYGSLGLLMSGHWSLCQAAVDRVLQ 55
                58899******************************************9998765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MGFITAVPES QRAALFQSLL YEACGRSINP VYGSLGLLMS GHWSLCQAAV DRVLQGGSPG  60
DVHSSGINPA SGDIVPPTRL NYRHQQQIKA AGVEGGAPQH VKGGDQCSIS QAKISVSSNC  120
TSVRRVSRSS SGTKSSDCAS GPSPPCYHSP SFSPFGIASL KQSDSSQTLS ACSNTTSVGV  180
PPSSSTASKS NSAKRLRLYW QDEEQYQLGV EVGQKSHRHQ QTSFEHDQRH IHCQNEDQQQ  240
NSSGNSMSGS LVEEGASSDA AFVGLDLNCT PNSGAPAVVC SPQSYGSSCR SLTQNPSVGN  300
CFDSTDLSYF SHCAPNVSPT RVFTLLPLLE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67420.12e-23LBD family protein