PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | GBG68702.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
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Family | Trihelix | ||||||||
Protein Properties | Length: 211aa MW: 24560.5 Da PI: 4.1516 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 34.3 | 6.1e-11 | 16 | 99 | 1 | 79 |
trihelix 1 rWtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79 rW + e+ L ++r+e++ ++++ lk++ W+ v ++mre+g+ r+ Ck+k++++ + +k+k++e++ s+++s + GBG68702.1 16 RWGDTETDWLCQFRNEVKVLMGEETeqygcsrLKAGFWKIVEQRMREKGYIRKDDLCKNKFNQILEYCRKLKAHERR--SGRESYW 99 8**************88888887433344444********************************************8..4555455 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MGLPLRSGSP PINTERWGDT ETDWLCQFRN EVKVLMGEET EQYGCSRLKA GFWKIVEQRM 60 REKGYIRKDD LCKNKFNQIL EYCRKLKAHE RRSGRESYWD INKARRKRYN VDFMLKRSWY 120 DIIDPVEKDK DSIDLSNLMD SGADEERLEH FKDRPRFDVH GDDDDDDDDD DDDDDDGGGG 180 GDDDDDDDDD DGGGGGNDDN NDEVLALDLE R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G25990.1 | 3e-07 | Trihelix family protein |