PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG68226.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

MYB

Protein Properties

Length: 911aa MW: 93334.7 Da PI: 5.414

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG68226.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	40.3	7.2e-13	16	65	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 +grW +eEd +l++ v+ G + W+++ ++ g ++R +k+c++rw++yl GBG68226.1 16 KGRWEPEEDAILLEFVRSNGAKEWNRVGEKTGhvLHRDGKSCRLRWFNYL 65 79**********************************************97 PP
2	Myb_DNA-binding	35.2	2.8e-11	72	115	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 + T++E e +++ + + G++ W+ Ia ++ gRt++++k++w++ GBG68226.1 72 EPLTEQEMEVIIEQHSRVGNK-WSVIATKLE-GRTDNEVKNWWYSN 115 567****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 911 aa Download sequence
MSEVQQSAQC LTKIKKGRWE PEEDAILLEF VRSNGAKEWN RVGEKTGHVL HRDGKSCRLR 60 WFNYLKPGLK KEPLTEQEME VIIEQHSRVG NKWSVIATKL EGRTDNEVKN WWYSNRKKWK 120 RRGGSANGGI CGNNTESCSR PQSLTSGGST GTANGSGTVL TALPPDGFNG GGGQNSSTTF 180 STSTGSNAVL CSDDVSANES AASDQAAAAA VLPTLHDFQT DYLMSSGAAP PGFSMPLGPI 240 ANNSCASFPS SNCHLVPIQL AQGALTDPQC LVKPAGGGSL CAASRIGTTM AGGGLCSGSR 300 LIHHCHPSTV ASALNNQSHA ALMSSHASLM AGAAGGGLLG GGGEVTLDHG RKRRIGQISG 360 GVSAAGLLPR GCISMNWIGA PCMSATSDCN AFVSSQMPAI IAPQGIHHSH QILSQAYSPT 420 ASASKVSEYL LAADHGLVSC ELMGLGIDTH QRPPSLLHGN DLLHPMASLQ TGLHHRDGSA 480 GMNWLSVTPP HFLATLGSQH MNLKTTADHP ASRSTLFSID DEGFHGHSGG ASSASLGGGA 540 GGCSSLPCSV SHHMDLQGTR IGVSEALNLP CKKEPLEFAI DSMAAAAGTG IRGHSSSPGP 600 GPFAGLYLTD ANNHINPTFN TTTLTSAAVI DMAADQLGAR LTSSSTAMCS GSMCTVPSQT 660 LSQAGNLQQE ANNTSLVCME CQPEIPKEVV VAAAAAAAAA AAATAEAAAG GGGGGGGGGG 720 GCALIMPCSA DVDLDIKSEG EGASNSQSAA MSETGNQPMS ASTPPGPASA SDASSDNATE 780 IQSSPKGGED QKAIPPDGTG YQTESSAPEK APDTPRPLLL RGDMDPTLRP ATIQESSSGT 840 VNPVVEPVPQ ADVAESDPAN RSDDLTVVSN AVVDVDAIYT AGEGEQDIMM TNDPFDLFTT 900 MNEFKFSSAD Q

Sequence ? help Back to Top

Protein Sequence Length: 911 aa Download sequence

MSEVQQSAQC LTKIKKGRWE PEEDAILLEF VRSNGAKEWN RVGEKTGHVL HRDGKSCRLR  60
WFNYLKPGLK KEPLTEQEME VIIEQHSRVG NKWSVIATKL EGRTDNEVKN WWYSNRKKWK  120
RRGGSANGGI CGNNTESCSR PQSLTSGGST GTANGSGTVL TALPPDGFNG GGGQNSSTTF  180
STSTGSNAVL CSDDVSANES AASDQAAAAA VLPTLHDFQT DYLMSSGAAP PGFSMPLGPI  240
ANNSCASFPS SNCHLVPIQL AQGALTDPQC LVKPAGGGSL CAASRIGTTM AGGGLCSGSR  300
LIHHCHPSTV ASALNNQSHA ALMSSHASLM AGAAGGGLLG GGGEVTLDHG RKRRIGQISG  360
GVSAAGLLPR GCISMNWIGA PCMSATSDCN AFVSSQMPAI IAPQGIHHSH QILSQAYSPT  420
ASASKVSEYL LAADHGLVSC ELMGLGIDTH QRPPSLLHGN DLLHPMASLQ TGLHHRDGSA  480
GMNWLSVTPP HFLATLGSQH MNLKTTADHP ASRSTLFSID DEGFHGHSGG ASSASLGGGA  540
GGCSSLPCSV SHHMDLQGTR IGVSEALNLP CKKEPLEFAI DSMAAAAGTG IRGHSSSPGP  600
GPFAGLYLTD ANNHINPTFN TTTLTSAAVI DMAADQLGAR LTSSSTAMCS GSMCTVPSQT  660
LSQAGNLQQE ANNTSLVCME CQPEIPKEVV VAAAAAAAAA AAATAEAAAG GGGGGGGGGG  720
GCALIMPCSA DVDLDIKSEG EGASNSQSAA MSETGNQPMS ASTPPGPASA SDASSDNATE  780
IQSSPKGGED QKAIPPDGTG YQTESSAPEK APDTPRPLLL RGDMDPTLRP ATIQESSSGT  840
VNPVVEPVPQ ADVAESDPAN RSDDLTVVSN AVVDVDAIYT AGEGEQDIMM TNDPFDLFTT  900
MNEFKFSSAD Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14750.1	2e-34	MYB family protein