PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG67973.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 365aa MW: 39341.7 Da PI: 3.9542

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG67973.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	29.5	2e-09	224	298	2	71
trihelix 2 WtkqevlaLiearr..emeerlrrgklkkplWeevskkm...rergferspkqCkekwenlnkrykkikegekkr 71 W ++ + aLiea+r ++ + r+ + +We++ +++ + rg ++ Ck+kw+ l ++y++i ++ k+ GBG67973.1 224 WDHSLTNALIEAKRleAIDPNGRKFDSGPLKWEAILAAVkriSGRGGDKKVASCKKKWNALTTKYRQIVDWHKRS 298 999********97788888899999*****999777778999*********************9974 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MDSGRLFGKS YEELLHSGDS TSHGEQSSSM NGSLTLWDFS DGTSSDEEDL FTPPABEVXT 60 QXLSTPSVHD ITGASGSMAM HHTHLTPRNL MGEGAYVQAH AAANFAAXNL MGEGAYVQAH 120 AAANFAAQHX SPSAQASGPV NQPRGPMASP GVPSQSCSGP ALSAGXHPXP GGGSTARSFG 180 QEGGVDASLQ TERECAXDDG DDEEDDDASE XSGAGGKKTR GXGWDHSLTN ALIEAKRLEA 240 IDPNGRKFDS GPLKWEAILA AVKRISGRGG DKKVASCKKK WNALTTKYRQ IVDWHKRSEF 300 VMTRWTRDDD DDDDDDDYDD GDYDDDDQDD DDYDDGDDDD DDYDDDYDGD YDDDYDDDEE 360 KADVG

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MDSGRLFGKS YEELLHSGDS TSHGEQSSSM NGSLTLWDFS DGTSSDEEDL FTPPABEVXT  60
QXLSTPSVHD ITGASGSMAM HHTHLTPRNL MGEGAYVQAH AAANFAAXNL MGEGAYVQAH  120
AAANFAAQHX SPSAQASGPV NQPRGPMASP GVPSQSCSGP ALSAGXHPXP GGGSTARSFG  180
QEGGVDASLQ TERECAXDDG DDEEDDDASE XSGAGGKKTR GXGWDHSLTN ALIEAKRLEA  240
IDPNGRKFDS GPLKWEAILA AVKRISGRGG DKKVASCKKK WNALTTKYRQ IVDWHKRSEF  300
VMTRWTRDDD DDDDDDDYDD GDYDDDDQDD DDYDDGDDDD DDYDDDYDGD YDDDYDDDEE  360
KADVG