PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG67833.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family C3H
Protein Properties Length: 658aa    MW: 74073 Da    PI: 8.8367
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG67833.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH171e-05561584225
                 -S---SGGGGTS--TTT.TT-SS-S CS
     zf-CCCH   2 ktelCrffartGtCkyG.drCkFaH 25 
                 +t+ Cr +++ G+CkyG d+C+F H
  GBG67833.1 561 RTSVCRAWQK-GECKYGaDKCRFRH 584
                 799*******.******44799877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 658 aa     Download sequence    
MSHRRVSYFG LPSSIPTLWQ SARAPTLSYR VKENSAPLLS EEKWDAWWED YIELAFCLLE  60
IEFRWSEAAP FGEGPKHPED TVELLIIQAW RTAEQGDLLG IVFGKVEEGN LALITDELLV  120
FLTQLVDDLP LDILSHSDKQ PGTHVLSQTL EPHLVWSTCT EIDEDNCLYP SQVLYLEIDI  180
TDLTFWDPIV RQNAARDEEI GGADEEEEEE EPSSEERDDP DYVPKSEAGI ADESSQPRDE  240
EEEEGNEQAE SEARDSGGKE SGQERNRERE FCRRGNAQTG GAWDMAKKER KLSDGKGPSV  300
NKLAEGDGGG RKEKRGDGGL KVKTKKVEED KQGARETKTK ESGIGGESDV RDAMGSTGKR  360
REEKEVKEGK EGKAKKEKKE RKGKEDDKHK KEASSVSPKK RKQRPEKQED EDGDGDLRKK  420
KVKIERKEGK LRFKTSSGAY GRGAWRKNDG YGDEAEKGEE VMPPPTDRSK CKGKKSDMQV  480
IVDATGKKTY KCDGCGRLLS SYFQLRRHKW KINSWRRKVG LPPLQGDDDE EDKGKGSADT  540
KKTKKKEAKR FKRDGKPQLK RTSVCRAWQK GECKYGADKC RFRHEVDSAG KSAGKGKKAS  600
LAGKGEKAQP EFRLQKEEPL LPRQDSMKRG KTAKKVRLLK KSNKPKKLSK KTNAGGKG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1399421KKRKQRPEKQEDEDGDGDLRKKK
2399423KKRKQRPEKQEDEDGDGDLRKKKVK
3400422KKRKQRPEKQEDEDGDGDLRKKK