PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG67692.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 485aa MW: 52541.8 Da PI: 9.4254

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG67692.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	29.4	2.1e-09	231	305	2	70
trihelix 2 WtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 W+ +e laL + re++ + + + ++ + ++v+++m+e g++rs++ + +kw +l+++y++i + ++ GBG67692.1 231 WSLEERLALAKYMREDDAMMAAVQprqkhqRRSVRNDWVARRMKEDGYHRSAEDVGKKWADLQNKYREIHDKCGG 305 99999999999999888888864222233377888999*******************************998765 PP

Sequence ? help Back to Top
Protein Sequence Length: 485 aa Download sequence
MYRSSVRSSG PQAEQGLLSH GDRWALDRGT VWGGEGLVNM GFEIFPRSNG PAISNFRRPP 60 PYRHNKHVGQ LHAEAAVLRP VSACRVRGMA VSVAMYGSFP KAARTSWGGW LLRLPNPTSA 120 LHQAKRCVGN AACQTRSRVP QPQSVFSRSA ARLCEKVLPF IPPSLVGRPK EIVGDVVHAG 180 SECWDEGFVS AVLSGRGGRG WQAGSAAPRS PAGDGDTEDD GEGGKQKKKS WSLEERLALA 240 KYMREDDAMM AAVQPRQKHQ RRSVRNDWVA RRMKEDGYHR SAEDVGKKWA DLQNKYREIH 300 DKCGGSGKPS FWDMSAKDKK REGLTFLFEE ELWDEMAWVQ GKRSTMCDNT MESSALPGAH 360 SGGSDNGTSP DTPQEDSESS RNSRRTERGK ASAEEGCSSS RSGSRFSMEE STLTLCAGLG 420 DAAGTLALAN TKGAQQMATQ IGAVASAMKD GNAVLQLLVE VMARRVGGGG GRREEGGDDM 480 NPSSK

Sequence ? help Back to Top

Protein Sequence Length: 485 aa Download sequence

MYRSSVRSSG PQAEQGLLSH GDRWALDRGT VWGGEGLVNM GFEIFPRSNG PAISNFRRPP  60
PYRHNKHVGQ LHAEAAVLRP VSACRVRGMA VSVAMYGSFP KAARTSWGGW LLRLPNPTSA  120
LHQAKRCVGN AACQTRSRVP QPQSVFSRSA ARLCEKVLPF IPPSLVGRPK EIVGDVVHAG  180
SECWDEGFVS AVLSGRGGRG WQAGSAAPRS PAGDGDTEDD GEGGKQKKKS WSLEERLALA  240
KYMREDDAMM AAVQPRQKHQ RRSVRNDWVA RRMKEDGYHR SAEDVGKKWA DLQNKYREIH  300
DKCGGSGKPS FWDMSAKDKK REGLTFLFEE ELWDEMAWVQ GKRSTMCDNT MESSALPGAH  360
SGGSDNGTSP DTPQEDSESS RNSRRTERGK ASAEEGCSSS RSGSRFSMEE STLTLCAGLG  420
DAAGTLALAN TKGAQQMATQ IGAVASAMKD GNAVLQLLVE VMARRVGGGG GRREEGGDDM  480
NPSSK