PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG67453.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 1022aa MW: 112998 Da PI: 8.9389

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG67453.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	29.3	2.2e-09	260	335	2	70
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 W+ +e +L++ +re e +l r + k+ +We+++k+m+ g + C +kw+n+ ykki++ ++ GBG67453.1 260 WSLEEQIQLVRCKREQEMHLAglghnygRMRTKEWKWEDIAKRMANAGRPKDTDDCMKKWDNIFENYKKIQRFQNA 335 9999999999999966655553333332778***************************************987665 PP

Sequence ? help Back to Top
Protein Sequence Length: 1022 aa Download sequence
MADMQRRLPL LLLVVVVFLF VVFLHVCLSC QPWKQRRKRR ASTKRGVQVR AVPPMAGMQV 60 RAVLPAAEGG RRPPTTEPSR RYDPSMYSHL PSWETPLPPS DEESEGDELP TFPLASGSTQ 120 LLSQTVLAGG LASNGRGEYT TLLQQGLGDD DDGGVDLPFG LSSSGGREAS RTFIIDIDPS 180 PRGVQQSGSR HTEQSTLRGD GQFGEDVEAG DDDDDIPIRS LGKTGRRGRG RSRGAVRGRS 240 VGRGGRGGVS DDGRNSATYW SLEEQIQLVR CKREQEMHLA GLGHNYGRMR TKEWKWEDIA 300 KRMANAGRPK DTDDCMKKWD NIFENYKKIQ RFQNASGRPN FFRLLNEERK EHNFKFRMER 360 ALYNEIHIRM VGNHTIFPPN IGDTGSPDRV QLPRRGAGAG ESVGNEGAGE GLPEERSTTT 420 AMLAAGLEAQ GRGRRQAPKA KRVRTEDALP RVRGRGAQGW AGEVEGDCDD EFTAEEEQAE 480 ATTSEVRESN RQRSSDRTAS KRMQTPPHEA QQLHGRETRT EKAPVVDLGG DDDEPLERRR 540 IRIRTTATPP PEVVVRVATN DRPVSGRLPA TPSQPRHRND AGDGGSVQRV GGGEVVADAR 600 AVGAQVAGAV GAVGSGNVGA VATGREDAAV VATTREEARG ERKVEREAGE AGSSRPRRSV 660 MTKDLIDRAV LWVDDKAFWT XGEGRRLYNI VHETKDYFVA IASGLPAPDV PRSVVLPKAS 720 TRVARIVDQS QLQQAISRAA TVENVALRIL HGWVFKSGNR PRGYHVAFQY SLESFATDIA 780 RAMWYGEEWC ELVSPAICVH TRDLFMDLPL WFAGANIEDR PEDNDMAAHQ ESTVIRVAYA 840 FHTAVQMEAL IDSEFISHDR LSRVADCFRL LLAACMWIMR MAEDDPHSHY EAFYFVDLVA 900 KPTLVAAMHR SFNHRRSVVR AAKVVTDRLG KATATFGQYP NYIPQWAPCC IAFRHDASIT 960 GPEDAKSQIG WVPAPLMMTT TTMGKMTRRG GGGGRLGLMV GWGGRRMGWE RRFGCFYGLA 1020 RM

Sequence ? help Back to Top

Protein Sequence Length: 1022 aa Download sequence

MADMQRRLPL LLLVVVVFLF VVFLHVCLSC QPWKQRRKRR ASTKRGVQVR AVPPMAGMQV  60
RAVLPAAEGG RRPPTTEPSR RYDPSMYSHL PSWETPLPPS DEESEGDELP TFPLASGSTQ  120
LLSQTVLAGG LASNGRGEYT TLLQQGLGDD DDGGVDLPFG LSSSGGREAS RTFIIDIDPS  180
PRGVQQSGSR HTEQSTLRGD GQFGEDVEAG DDDDDIPIRS LGKTGRRGRG RSRGAVRGRS  240
VGRGGRGGVS DDGRNSATYW SLEEQIQLVR CKREQEMHLA GLGHNYGRMR TKEWKWEDIA  300
KRMANAGRPK DTDDCMKKWD NIFENYKKIQ RFQNASGRPN FFRLLNEERK EHNFKFRMER  360
ALYNEIHIRM VGNHTIFPPN IGDTGSPDRV QLPRRGAGAG ESVGNEGAGE GLPEERSTTT  420
AMLAAGLEAQ GRGRRQAPKA KRVRTEDALP RVRGRGAQGW AGEVEGDCDD EFTAEEEQAE  480
ATTSEVRESN RQRSSDRTAS KRMQTPPHEA QQLHGRETRT EKAPVVDLGG DDDEPLERRR  540
IRIRTTATPP PEVVVRVATN DRPVSGRLPA TPSQPRHRND AGDGGSVQRV GGGEVVADAR  600
AVGAQVAGAV GAVGSGNVGA VATGREDAAV VATTREEARG ERKVEREAGE AGSSRPRRSV  660
MTKDLIDRAV LWVDDKAFWT XGEGRRLYNI VHETKDYFVA IASGLPAPDV PRSVVLPKAS  720
TRVARIVDQS QLQQAISRAA TVENVALRIL HGWVFKSGNR PRGYHVAFQY SLESFATDIA  780
RAMWYGEEWC ELVSPAICVH TRDLFMDLPL WFAGANIEDR PEDNDMAAHQ ESTVIRVAYA  840
FHTAVQMEAL IDSEFISHDR LSRVADCFRL LLAACMWIMR MAEDDPHSHY EAFYFVDLVA  900
KPTLVAAMHR SFNHRRSVVR AAKVVTDRLG KATATFGQYP NYIPQWAPCC IAFRHDASIT  960
GPEDAKSQIG WVPAPLMMTT TTMGKMTRRG GGGGRLGLMV GWGGRRMGWE RRFGCFYGLA  1020
RM