PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG66738.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 624aa MW: 67935.2 Da PI: 7.9913

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG66738.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	32.9	1.6e-10	377	439	2	57
trihelix 2 WtkqevlaLiearremeerlrrg.......klkkplWeevskkmrergferspkqCkekwenl 57 W+ +e l+L++ +r+ ++ + ++ k k ++W +++k+m+++g++r+ +qC ++wen+ GBG66738.1 377 WSLNESLVLVRCKRDQDDYFANAgtnfarmKMKDQKWMDIAKRMEKEGVRRNREQCMKRWENI 439 ************77777775423333338*****************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 624 aa Download sequence
MADMVRTLAL LIIPLGAVVL FIALHACHLA GARIRRGRRK GLRRLRQGAS ASKGMGDEYS 60 RGCEGFGMGR GAYGGGSGMQ HNVHHRFDPN SYSHLPPHQQ PLPDDTTWTP PPSTLGLAWG 120 STQTSYDTPP RVESTGGGVG PMSGLLGETR GRGRHPFDLQ LSPTTTMGMS RMVLVQRSGQ 180 GGGARTQTMH ASDLDDGMPM HRPNHMSRPA PSQAAPAGSV SYHQPPAGAT MQDHRPDVGG 240 VAESPRCVEC IVYRFNSLRA TSDGDGAGAT MQERRPDLGE VAESPRCVER IVCRFNSSRP 300 TSDGDGGGRD GGASEADHVD VKDDDGDDDD EDEAPVKEAA SSGTKKQVSK GRGKAKGKDK 360 EGDTNGEGGG SGARGNWSLN ESLVLVRCKR DQDDYFANAG TNFARMKMKD QKWMDIAKRM 420 EKEGVRRNRE QCMKRWENIF GWGEDAGDGC GSRSSSNGIH GKRKNARQLA FKAVTDVMKT 480 HSAVVAESVD RASKRQCDVL QRQCDIMEKK ARTQKRQCEV LDVGQRMLCD ALRKIAGHEV 540 RHYEVDAILH VIAALGYADN MLCEVVSYAT KVGRAIPNRW EGGVDVLADI VDLLMSNITN 600 EHEERMTVPA EFRSVNEQFV DVRL

Sequence ? help Back to Top

Protein Sequence Length: 624 aa Download sequence

MADMVRTLAL LIIPLGAVVL FIALHACHLA GARIRRGRRK GLRRLRQGAS ASKGMGDEYS  60
RGCEGFGMGR GAYGGGSGMQ HNVHHRFDPN SYSHLPPHQQ PLPDDTTWTP PPSTLGLAWG  120
STQTSYDTPP RVESTGGGVG PMSGLLGETR GRGRHPFDLQ LSPTTTMGMS RMVLVQRSGQ  180
GGGARTQTMH ASDLDDGMPM HRPNHMSRPA PSQAAPAGSV SYHQPPAGAT MQDHRPDVGG  240
VAESPRCVEC IVYRFNSLRA TSDGDGAGAT MQERRPDLGE VAESPRCVER IVCRFNSSRP  300
TSDGDGGGRD GGASEADHVD VKDDDGDDDD EDEAPVKEAA SSGTKKQVSK GRGKAKGKDK  360
EGDTNGEGGG SGARGNWSLN ESLVLVRCKR DQDDYFANAG TNFARMKMKD QKWMDIAKRM  420
EKEGVRRNRE QCMKRWENIF GWGEDAGDGC GSRSSSNGIH GKRKNARQLA FKAVTDVMKT  480
HSAVVAESVD RASKRQCDVL QRQCDIMEKK ARTQKRQCEV LDVGQRMLCD ALRKIAGHEV  540
RHYEVDAILH VIAALGYADN MLCEVVSYAT KVGRAIPNRW EGGVDVLADI VDLLMSNITN  600
EHEERMTVPA EFRSVNEQFV DVRL