PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG66408.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family LFY
Protein Properties Length: 286aa    MW: 32819.3 Da    PI: 8.5457
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG66408.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY113.23.7e-351715210146
     FLO_LFY  10 lfkwdpraaaaapparlleeaavseapleaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeelddlmkslseifrldllvGeryG 108
                 l + d+r + ++pp     ++  +++p  + a   +++ ++le+lfk+yG+r +tv  + ++Gftv+tLv+m+++eld ++k+++e   ++llvGer+G
  GBG66408.1  17 LIRRDSRVVLQQPPPPPPLHNLPPPSP-PTLALLPHVSSKNLEDLFKDYGLRAATVMTMLQMGFTVNTLVNMTENELDYVIKTMIENSNVELLVGERFG 114
                 678888888766665554455444444.466677788899*********************************************************** PP

     FLO_LFY 109 ikaavraerrrleeeeaekkrrkllsedeetaldalsq 146
                 ikaa raerr+l+e+ +++    l + +++ +ld  + 
  GBG66408.1 115 IKAACRAERRWLDEQXERQXLDALAKLERKRKLDEDAA 152
                 **************553333333333333333332222 PP
2FLO_LFY195.15.1e-60154282258383
     FLO_LFY 258 qCrefLlqvqkiakerGekcP...tkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgw 353
                 qC + + + q+   +  +k P     vtnqvfr+ak +g  yinkPkmr+YvhCYalhcLd  +s+alr+  kergenvGaw++acy+pl+ +a+++gw
  GBG66408.1 154 QCARQVQETQHHFCTXPQKRPdsgVEVTNQVFRHAKYKGMGYINKPKMRQYVHCYALHCLDMCQSDALRKLCKERGENVGAWCNACYTPLIMMARESGW 252
                 67777777777666666666632258************************************************************************* PP

     FLO_LFY 354 didavfnahprLsiWYvPtkLrqLChlers 383
                 di+++fn+h++L+iWYvP kL q+C ler 
  GBG66408.1 253 DIEGIFNRHEKLRIWYVPKKLVQMCSLERA 282
                 ****************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MLEAVVDNGY ITSPVGLIRR DSRVVLQQPP PPPPLHNLPP PSPPTLALLP HVSSKNLEDL  60
FKDYGLRAAT VMTMLQMGFT VNTLVNMTEN ELDYVIKTMI ENSNVELLVG ERFGIKAACR  120
AERRWLDEQX ERQXLDALAK LERKRKLDED AATQCARQVQ ETQHHFCTXP QKRPDSGVEV  180
TNQVFRHAKY KGMGYINKPK MRQYVHCYAL HCLDMCQSDA LRKLCKERGE NVGAWCNACY  240
TPLIMMARES GWDIEGIFNR HEKLRIWYVP KKLVQMCSLE RAGRPV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.11e-44LFY family protein