PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG66283.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 584aa MW: 64922.7 Da PI: 10.3556

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG66283.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	27.1	1.1e-08	5	46	28	69
trihelix 28 kplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 + +W +v++++++ g+ r++++C kw+nl +++kk+ + ++ GBG66283.1 5 EWKWLDVAQRLKKVGVDREAERCGTKWDNLMQQFKKVHHFQG 46 669*********************************988665 PP

Sequence ? help Back to Top
Protein Sequence Length: 584 aa Download sequence
MKPREWKWLD VAQRLKKVGV DREAERCGTK WDNLMQQFKK VHHFQGLSGK QNFLQFSGKE 60 RLSKGFNFNM DRAVYDEIRG STAKSHTINP MNVANTGAPG GVHLSSATFG DPECDGDGGA 120 GHDDDEDGST RVHGVIDHRC RSIRRGTSER HRLVVPPWSA KLRFVIVNAI VAIIATFAVF 180 PAVSVIVFIT VKGRRRQRLP ARRRQRRHHR HTHHRSRDDD LNLTTRFAIA AKILTLQVIK 240 LEVGVSCAMS SRGSGRGKSA TNLAVEAATW EKKGCHVTNK KRKLVQGGSS LARYVQDEEW 300 VPEGVASQVE SDFEEEEEVS LKRKSSRPES GGLRIEDVGE RRGGGGRAIM EDVIDVDVAA 360 ASRQGGGTAV AQQNRTPVPR VNDGPVVQEG VVRARTPATP RMTTATDVGV NVQAIAQGKK 420 SRSPAVEPPA VRRSIVLPHT TIPQYKIDDE SELNVAKERA FKVQTIALRV IHGWVFKLTN 480 RQRGYHTAYG YALNHTATDI ARAIWMGEDW RVCVSPMVFH ITLNMDMKLP LWFVDTNIED 540 RHENGELAAY QEASIQRLVG AFMSVLSMAE GIDGGRVSHE RLKS

Sequence ? help Back to Top

Protein Sequence Length: 584 aa Download sequence

MKPREWKWLD VAQRLKKVGV DREAERCGTK WDNLMQQFKK VHHFQGLSGK QNFLQFSGKE  60
RLSKGFNFNM DRAVYDEIRG STAKSHTINP MNVANTGAPG GVHLSSATFG DPECDGDGGA  120
GHDDDEDGST RVHGVIDHRC RSIRRGTSER HRLVVPPWSA KLRFVIVNAI VAIIATFAVF  180
PAVSVIVFIT VKGRRRQRLP ARRRQRRHHR HTHHRSRDDD LNLTTRFAIA AKILTLQVIK  240
LEVGVSCAMS SRGSGRGKSA TNLAVEAATW EKKGCHVTNK KRKLVQGGSS LARYVQDEEW  300
VPEGVASQVE SDFEEEEEVS LKRKSSRPES GGLRIEDVGE RRGGGGRAIM EDVIDVDVAA  360
ASRQGGGTAV AQQNRTPVPR VNDGPVVQEG VVRARTPATP RMTTATDVGV NVQAIAQGKK  420
SRSPAVEPPA VRRSIVLPHT TIPQYKIDDE SELNVAKERA FKVQTIALRV IHGWVFKLTN  480
RQRGYHTAYG YALNHTATDI ARAIWMGEDW RVCVSPMVFH ITLNMDMKLP LWFVDTNIED  540
RHENGELAAY QEASIQRLVG AFMSVLSMAE GIDGGRVSHE RLKS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	196	207	RQRLPARRRQRR