PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG66000.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 289aa    MW: 31769.1 Da    PI: 5.6629
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG66000.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix29.71.7e-0992165570
    trihelix   5 qevlaLiearremeerlr.......rgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekk 70 
                 ++  aLi+a+r+ +++l        r k k  +W++v k++ + g+ +r+++ C +kw+nl +++k + + +++
  GBG66000.1  92 EHMIALIRAKRDQDSHLAglahttgRMKTKTWKWDDVEKRLVHMGVtSRKAVDCGKKWDNLYQQFKIVHKFMGE 165
                 67889******888888755554335689999*********99999799*****************99887665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MRGVANITGG ADDILGDEDG AVAEDCEVDD GAGKDDEEDD EEMEIHPVGR KRGGSRAAKK  60
LSETRTGRKG KNGVEDASAG EGSKSQDFLT VEHMIALIRA KRDQDSHLAG LAHTTGRMKT  120
KTWKWDDVEK RLVHMGVTSR KAVDCGKKWD NLYQQFKIVH KFMGESGKPN FFTLMPGERK  180
ERGFDFWMDE RVYSEMAAMT RSDHTIHPTN LADTGATGGV QMPGPRGGRN ESGGSEGGGD  240
GQDDDQGSTR DSISSCEYAL RPPPEVVSER VRPRPHRPLT EGSRFEAFR