PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG64919.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 483aa MW: 51228.2 Da PI: 5.0382

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG64919.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	32	3.2e-10	305	388	1	79
trihelix 1 rWtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79 rW ++e+ + ++++ e++ +++++ lk lW++vs++m++ + r+ +C ++ +++ y+ +k++++ ++s++ + GBG64919.1 305 RWAEKETTVFLRVVYEVKMGMGENSeamgiapLKVRLWADVSARMKQAHYVREDDECMNRYHFVRNNYRLVKDHNRC--PGSHKYW 388 8************99999998755667777*****************************************96..4555444 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
MAGSNDRLGL SNIEDWGLTP SSQGHDADCM QIPYSQIDAA FGGRRVTTVD GDEDQLRESL 60 RLRAMANDGH HGLCGDFAAG LSLSPTPLSF PSQFSMRPSA ETMPGTPQGR RTAFDTPVTP 120 LHITASAPSA MESPSVGCGS TPVSAHSSLP GGSAAMGDRG GPASPLTVRS ERLSNHVNEV 180 NGQVSGGGAA CPQRRTILQQ IIHDIEFGDV DPTANNRPRS LQQQFNGAWT QTPMRDGCEG 240 GGLGGGLQGC ANEAGIRTTR EGSRSSLSNA SAGASGPSGD KVVLQEGEVS GAPADKGKKK 300 KASNRWAEKE TTVFLRVVYE VKMGMGENSE AMGIAPLKVR LWADVSARMK QAHYVREDDE 360 CMNRYHFVRN NYRLVKDHNR CPGSHKYWTM DQATRKANGL DFLMRREWYN ILHMHEGDKD 420 TINPNSLTDP GAEDHNRANS EDSDVDEGDD PAADDEAGDV GSGGGDGEGG MDGWGGGGGS 480 DGA

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

MAGSNDRLGL SNIEDWGLTP SSQGHDADCM QIPYSQIDAA FGGRRVTTVD GDEDQLRESL  60
RLRAMANDGH HGLCGDFAAG LSLSPTPLSF PSQFSMRPSA ETMPGTPQGR RTAFDTPVTP  120
LHITASAPSA MESPSVGCGS TPVSAHSSLP GGSAAMGDRG GPASPLTVRS ERLSNHVNEV  180
NGQVSGGGAA CPQRRTILQQ IIHDIEFGDV DPTANNRPRS LQQQFNGAWT QTPMRDGCEG  240
GGLGGGLQGC ANEAGIRTTR EGSRSSLSNA SAGASGPSGD KVVLQEGEVS GAPADKGKKK  300
KASNRWAEKE TTVFLRVVYE VKMGMGENSE AMGIAPLKVR LWADVSARMK QAHYVREDDE  360
CMNRYHFVRN NYRLVKDHNR CPGSHKYWTM DQATRKANGL DFLMRREWYN ILHMHEGDKD  420
TINPNSLTDP GAEDHNRANS EDSDVDEGDD PAADDEAGDV GSGGGDGEGG MDGWGGGGGS  480
DGA