PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG64569.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 705aa MW: 76693.8 Da PI: 4.3847

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG64569.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	30.4	1e-09	228	299	1	67
trihelix 1 rWtkqevlaLiearremeerlrrgk.....lkkplWeevskkmrergferspkqCkekwenlnkrykkikeg 67 +W+ +e laL +++re++ + +++ +k + e+++++mr++g +rs+k C++kw l ++ k +++ GBG64569.1 228 QWSLEECLALARIQREDDALMADASsvhklKKHRRREWIARRMRDEGWNRSAKDCRKKWFALGQKLKVLADK 299 7*****************99875566657788899********************9998888877765 PP

Sequence ? help Back to Top
Protein Sequence Length: 705 aa Download sequence
MLSQDADRYG VPPSFPSQVA SLPQWRNDPP GLREMRCASQ LPFQQLTMAL AYDGQQMLGS 60 PQPRATSSPF SGFTARSVPP PGFTATLLGE DDDVECGVDG SGVGFGVTGD RRADHEREHD 120 NAAMGRCGDA GHEFGHYEQC GGGHVPTVDI SNPSRPAAER SGHATPTHGQ RANAGDVPAT 180 AVLQQPSPFA PATGAGAGTG PIGRRRGRPP AATSTASAQA PPAQKKVQWS LEECLALARI 240 QREDDALMAD ASSVHKLKKH RRREWIARRM RDEGWNRSAK DCRKKWFALG QKLKVLADKV 300 GQSGKPGYFD MTVEERKAEG LYANCDRRLW AEMDWILQKP SGTCDNTLNS DSLNAKDGDS 360 SAKGSSDRGG SDRERSDGKA SAGKTRRTSS GRVNDGDGPS SMSGMSVALA ESTRVYVDGL 420 DRAAATIAEA QTAGATMVAG RLGDMATQIG AVASAMTEGN AVLQLLVGVM ASRGPRGPNS 480 PREARGGRDN DPSSLHTNDD AHNDDDDVDD DDDDDDDDDD DIDDDDDDDD DDDDAPMKML 540 IMMMVMSVML LLLLMMMMMT HASHTHSAGP KGSASLHTDD NDDDDDDDDD DDDDNDEDDD 600 DDDDDDDDDT GDDEKPPMMM MMMMMMTAMI KPKMVMMNEN YRRYPHIMKN VDDDNGEDYR 660 RWQRSTSEGR RQIHQDTETE SWPESKRTSH PKKQGILSHT EVSNA

Sequence ? help Back to Top

Protein Sequence Length: 705 aa Download sequence

MLSQDADRYG VPPSFPSQVA SLPQWRNDPP GLREMRCASQ LPFQQLTMAL AYDGQQMLGS  60
PQPRATSSPF SGFTARSVPP PGFTATLLGE DDDVECGVDG SGVGFGVTGD RRADHEREHD  120
NAAMGRCGDA GHEFGHYEQC GGGHVPTVDI SNPSRPAAER SGHATPTHGQ RANAGDVPAT  180
AVLQQPSPFA PATGAGAGTG PIGRRRGRPP AATSTASAQA PPAQKKVQWS LEECLALARI  240
QREDDALMAD ASSVHKLKKH RRREWIARRM RDEGWNRSAK DCRKKWFALG QKLKVLADKV  300
GQSGKPGYFD MTVEERKAEG LYANCDRRLW AEMDWILQKP SGTCDNTLNS DSLNAKDGDS  360
SAKGSSDRGG SDRERSDGKA SAGKTRRTSS GRVNDGDGPS SMSGMSVALA ESTRVYVDGL  420
DRAAATIAEA QTAGATMVAG RLGDMATQIG AVASAMTEGN AVLQLLVGVM ASRGPRGPNS  480
PREARGGRDN DPSSLHTNDD AHNDDDDVDD DDDDDDDDDD DIDDDDDDDD DDDDAPMKML  540
IMMMVMSVML LLLLMMMMMT HASHTHSAGP KGSASLHTDD NDDDDDDDDD DDDDNDEDDD  600
DDDDDDDDDT GDDEKPPMMM MMMMMMTAMI KPKMVMMNEN YRRYPHIMKN VDDDNGEDYR  660
RWQRSTSEGR RQIHQDTETE SWPESKRTSH PKKQGILSHT EVSNA