PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG64257.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 401aa    MW: 41939 Da    PI: 6.3249
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG64257.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix26.61.6e-082422811958
    trihelix  19 erlrrgklkkplWeevskkmrergferspkqCkekwenln 58 
                 + + + k ++++ e+++++++e+g++r+++ C++kw +l+
  GBG64257.1 242 NGVHKHKTRAKRYEWIADRLKEEGYNRTAEDCRKKWTKLK 281
                 333445799****************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    
MHDKSIGVYS PVELPSSAWG GAVGNDDLSA AWAPGSSQGM AHSPYGSVMS CGVTGPRRSS  60
PGGRMENVVM ADHTERQSHV PANAQPQPQT MRAQVQGPVP ARLSDGGFMH GQLSGWGGGF  120
SSFGTAGGGE RTAFAVEGWH GETAAMQFGD EAVASSTPSR SGGPAGNVTG KRTADNAVGE  180
GSVMRGDVGR SAEDTTSGQK KQCARRAPRA EGGKKNNPWT LEERIALARN CAEDDALMAD  240
ANGVHKHKTR AKRYEWIADR LKEEGYNRTA EDCRKKWTKL KEIVSQIGDK CYRSGEAGYF  300
NMTTEQRREK DVCTTFEEPL WDAMEWWRLK KSYTCDATLA SEDLASGGGS GSGRSGGVSD  360
GGEGGGGDLL GQGQGGTGPG LAGGGSRSGE IGEGSEPGKE A