PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG63194.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

ZF-HD

Protein Properties

Length: 743aa MW: 81260.2 Da PI: 8.286

Description

ZF-HD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG63194.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	ZF-HD_dimer	52	1.6e-16	9	56	5	57
ZF-HD_dimer 5 rYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57 ++ eClkN Aas+Gg+a+DGC+ f++s + + +C CgC FHRr + GBG63194.1 9 VWGECLKNIAASVGGQAFDGCQQFYAS-----EDDPQTCVGCGCFVGFHRRLE 56 689*********************9.....346899**********975 PP

Sequence ? help Back to Top
Protein Sequence Length: 743 aa Download sequence
MSFLQQLHVW GECLKNIAAS VGGQAFDGCQ QFYASEDDPQ TCVGCGCFVG FHRRLESHLQ 60 SSPSPSSEFA TALSAVPNAR HHPQQQHHPH NQVHHEDQVQ VHGGARMAGP VHLHSPPRLL 120 TASDLHLDVG LASSLSNSVN GCTDFTPTLA AAVSSLGSTD QSSHMDMVGN PLLLGSGLSL 180 GSEPTPSHPA STVTAIDSKP NSLGFNPSLG LGPVQSPGHH GHDFAAAAAA GLSNSPRLSL 240 ADGLTLMAST GQRVLSGGSS QGSRTDDPSD ISNHSAAGRF SSFCSPAAAA AAGLGNSVVE 300 LDLNANGIMG KRRRDIGVFG KRRFGPCPGS RGRLRDEYPD VWADIAPDNK LTEEERENLN 360 TTSNKTLRFR CSNVACGNVW EAKLSGIIQK LEKRRAKLGP CANIGSHCPA CGKLKRTVGK 420 YGTRGTLKEK YPAIWNDISE DNDLTPEEKD RISVTCSKHY KFRCSRHSCG HKWIAAPNAI 480 VQKLESRQRM NTCFRPGPGI HCPACGKLER GRGKLKDEFP SIWADISLDN DLSSGERDNI 540 STTSNKHIKL KCSRSGCGYE WVESPCNTVR RLERRLALPE HLPNRDSHCP ECGAQRRRPE 600 KFRALGSAGS SSNSSASNAS VPPRPPPSLP SSAQIAVAAV ADALQHVPGL HHQHHSQQHQ 660 HQQQHQDQHQ HQHQHQHQHQ HQHQHQHQHQ HQHQHQHQHQ HQHQHQHQHQ QQHQQQHFMQ 720 LHASCGPLDH NFMGDRTFPR LTD

Sequence ? help Back to Top

Protein Sequence Length: 743 aa Download sequence

MSFLQQLHVW GECLKNIAAS VGGQAFDGCQ QFYASEDDPQ TCVGCGCFVG FHRRLESHLQ  60
SSPSPSSEFA TALSAVPNAR HHPQQQHHPH NQVHHEDQVQ VHGGARMAGP VHLHSPPRLL  120
TASDLHLDVG LASSLSNSVN GCTDFTPTLA AAVSSLGSTD QSSHMDMVGN PLLLGSGLSL  180
GSEPTPSHPA STVTAIDSKP NSLGFNPSLG LGPVQSPGHH GHDFAAAAAA GLSNSPRLSL  240
ADGLTLMAST GQRVLSGGSS QGSRTDDPSD ISNHSAAGRF SSFCSPAAAA AAGLGNSVVE  300
LDLNANGIMG KRRRDIGVFG KRRFGPCPGS RGRLRDEYPD VWADIAPDNK LTEEERENLN  360
TTSNKTLRFR CSNVACGNVW EAKLSGIIQK LEKRRAKLGP CANIGSHCPA CGKLKRTVGK  420
YGTRGTLKEK YPAIWNDISE DNDLTPEEKD RISVTCSKHY KFRCSRHSCG HKWIAAPNAI  480
VQKLESRQRM NTCFRPGPGI HCPACGKLER GRGKLKDEFP SIWADISLDN DLSSGERDNI  540
STTSNKHIKL KCSRSGCGYE WVESPCNTVR RLERRLALPE HLPNRDSHCP ECGAQRRRPE  600
KFRALGSAGS SSNSSASNAS VPPRPPPSLP SSAQIAVAAV ADALQHVPGL HHQHHSQQHQ  660
HQQQHQDQHQ HQHQHQHQHQ HQHQHQHQHQ HQHQHQHQHQ HQHQHQHQHQ QQHQQQHFMQ  720
LHASCGPLDH NFMGDRTFPR LTD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18835.1	1e-10	ZF-HD family protein